Gene Information

Name : B739_1126 (B739_1126)
Accession : YP_006723624.1
Strain : Riemerella anatipestifer RA-CH-1
Genome accession: NC_018609
Putative virulence/resistance : Virulence
Product : Nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1214913 - 1215893 bp
Length : 981 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAACAGGAAAATATTAATTACTGGAGGGGCAGGTTTTATTGGCTCGAACCTTACAGAACACTTTTTGAGTAAAAA
TTATCAAGTAAGAGTTTTAGATAACTTTTCCACAGGTCATAAATACAATATAGAACCTTTTTTTAAGAATGAAAAATTTG
AATTAATTGAAGGGGATATTAGGAACTTAGAGATTTGTAATGAGGCATGTGAAGGAGTAGACTATGTCTTACATCAGGCC
GCTTTAGGTTCTGTTCCTCGCTCTATTGAAAATCCAATTACAAGTAATGAAGTTAATGTTTCGGGATTTCTTAATATGTT
GGTAGCAGCTAGAGATGCTAAAGTTAAACGCTTTGTGTATGCAGCAAGTTCTTCTACTTATGGAGATTCCCAATCGTTAC
CAAAAGTAGAAGAGGTTATTGGAAAGCCACTGTCACCTTATGCGATTACTAAATATGTTAATGAACTCTATGCTGATGTG
TTTAGTCGTACTTATGGTATGGAGTGCATAGGCTTGAGATATTTTAATGTTTTTGGTAGAAGACAAGACCCTAAAGGAGC
CTATGCAGCGGTTATTCCAAAATTTGTGATTCAGTTGATGAATTATCAGTCGCCAACCATCAATGGTGATGGTAGTTACT
CAAGAGATTTCACTTATATTGATAATGTGATTCAGATGAATGAGTTAGCAATGTTAACCGATAATCCGGAAGCTGTAAAT
ACCGTTTATAACACGGCGGTAGGAGATAGGACTACTATTAAACAAATGGCACAATTACTGAAAGAATATTTGTCGAAATA
CGATGAGAAAATAGGCGAAGTTGAAATTTTGCACGGTCCTAATAGAGTGGGAGATATACCTCATTCTTTAGCATCTATTG
ATAAAGCAAAAGAAAATTTGGGGTACATGCCTTCTCATATTTTTAAAGAGGGATTGAAGGAAGCTGTAGACTGGTATTGG
GAAAACTTGAATAATAAATAA

Protein sequence : 
MNNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKNEKFELIEGDIRNLEICNEACEGVDYVLHQA
ALGSVPRSIENPITSNEVNVSGFLNMLVAARDAKVKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADV
FSRTYGMECIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTDNPEAVN
TVYNTAVGDRTTIKQMAQLLKEYLSKYDEKIGEVEILHGPNRVGDIPHSLASIDKAKENLGYMPSHIFKEGLKEAVDWYW
ENLNNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-75 54
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-75 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B739_1126 YP_006723624.1 Nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-75 54