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Name : B739_1123 (B739_1123) Accession : YP_006723621.1 Strain : Riemerella anatipestifer RA-CH-1 Genome accession: NC_018609 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 1210168 - 1211649 bp Length : 1482 bp Strand : + Note : - DNA sequence : GTGAAGGAAATTTTTCAATGGGCAAAAAAATACAGGAGAAGCTACTTAAGAAAAAAAATATTACTATTGGGAATAGGAGA AGAGTCGGTTGCTATTGCAAAAGCGGTGATGGGTAATCCTTTTTTACCATACGAGGTCGTCGGGTTTATTACTGATCGAA AGGATTCAAGGAAAGCCAAACTCTTGGGGAAGAGAATTTATACCAGAGATTTTTTAGAAAAAAATACTAAGGAATATTTA GGGATAGATGGAGTGTTGATAGGGAGTAATATAGCTTCTAGGGAAGAGCTTACAGAATGGGTTAATTTGTTTTTAGAGAA AGATTTAAAAGTATTTAAATCTCCGACTGTTCAAAAGTTGAGAAATGATGGGAATAATATTAAAAATTTCCAGATAGAAG ATTTGCTTAATAGAAAACCTATTGTTATAGAAAATGAAGAAGTAAAAAAGAGGCATCATCAAAAGTCGGTTTTAGTAACA GGAGGAGCAGGCTCTATAGGGAGTGAAATTGTGAGACAAGTTGCCCAATTTGGGCCATCTTTAATAGTAGTTTTAGACCG AGCAGAAACGCCCTTACACGAGATACAACTAGAAGTAGAAGAAAATTACCCCAATATTAAGTTTGAGTTTATACTGGCGG ATATAACCAATAAAGAACGATTGGAAGCTGTGTTTAAGGAATACAACTTCTCTATGGTATATCACGCTGCTGCTTATAAG CATGTGCCATTGATGGAAAATAATCCACACGAAGCCGCCTTAGTTAATATACAAGGGAGTAAAAACTTGGCATTATTATC CAGTCGTTTTAAAGTTAATAGGTTTGTGATGGTCTCTACGGATAAGGCTGTTAACCCTACTAATGTGATGGGAGCGTCTA AAAGAGCAGCGGAACTTTTTGTTCAAGCATTACAAAATGAACCAGATAACCAAACTAAATTTATTACGACTAGATTTGGT AATGTGTTGGGGTCTAATGGTTCTGTAATTCCTCATTTTAGAAAACAAATAGAGAAAGGAGGTCCAGTTACAATTACACA TCCTGAAATAGTAAGGTATTTTATGACCATTCCTGAAGCGTGTGAACTTGTTTTACAAGCAGGAACTATGGGAAAAGGAG GAGAAATATTTGTGTTTGATATGGGGGAACCTGTGAAGATACTCAATCTTGCACGAAGAATGATTAAATTGTCTGGTCTA GAGCCAGATGTGGATATAGAAATAGTTTATACAGGTTTGAGACCTGGTGAAAAACTTTATGAGGAGCTATTGAGTGATGG TACTAAGACACTCCCAACGCACCACGAGAAAATTATGATTTCTAAAGACTCAGTTATGTTATATGCGGAAATAGACGAGT TGACCTCTAGGATATATGATAAAGCGAGGGAAAAAGATAAAGTAGAAGTCGTTAAGATTTTAAAAGAAATAGTTAAAGAG TTTAGAAGTAATAATTCTGTGTTTGAGTCTTTAGACAAGTAG Protein sequence : MKEIFQWAKKYRRSYLRKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITDRKDSRKAKLLGKRIYTRDFLEKNTKEYL GIDGVLIGSNIASREELTEWVNLFLEKDLKVFKSPTVQKLRNDGNNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVT GGAGSIGSEIVRQVAQFGPSLIVVLDRAETPLHEIQLEVEENYPNIKFEFILADITNKERLEAVFKEYNFSMVYHAAAYK HVPLMENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASKRAAELFVQALQNEPDNQTKFITTRFG NVLGSNGSVIPHFRKQIEKGGPVTITHPEIVRYFMTIPEACELVLQAGTMGKGGEIFVFDMGEPVKILNLARRMIKLSGL EPDVDIEIVYTGLRPGEKLYEELLSDGTKTLPTHHEKIMISKDSVMLYAEIDELTSRIYDKAREKDKVEVVKILKEIVKE FRSNNSVFESLDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-75 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B739_1123 | YP_006723621.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 3e-66 | 41 |
