Gene Information

Name : smpB (C248_0872)
Accession : YP_006709614.1
Strain : Staphylococcus aureus 08BA02176
Genome accession: NC_018608
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 886049 - 886513 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAAGAAGAAATCACCAGGTACATTAGCGGAAAATCGTAAAGCTAGACATGATTATAATATTGAAGACACGATTGA
AGCGGGAATTGTATTGCAAGGCACAGAAATAAAATCAATTCGCCGAGGTAGTGCTAACCTTAAAGATAGTTATGCGCAAG
TTAAAAACGGTGAAATGTATTTGAATAATATGCATATAGCACCATACGAAGAAGGGAATCGTTTTAATCACGATCCTCTT
CGTTCTCGAAAATTATTATTGCATAAACGTGAAATCATTAAATTAGGTGATCAAACACGTGAAATTGGTTATTCGATTGT
GCCGTTAAAGCTTTATTTGAAGCATGGACATTGTAAAGTATTGCTTGGTGTCGCACGAGGTAAGAAAAAATATGATAAAC
GTCAAGCTTTAAAAGAAAAAGCAGTCAAACGAGATGTTGCGCGCGATATGAAAGCCCGTTATTAA

Protein sequence :
MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPL
RSRKLLLHKREIIKLGDQTREIGYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-64 100
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-31 50
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-24 44