Gene Information

Name : set6 (C248_0472)
Accession : YP_006709233.1
Strain : Staphylococcus aureus 08BA02176
Genome accession: NC_018608
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 478882 - 479562 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTTAAAGCGATAGCAAAAGCAAGTTTAGCATTGGGAATGTTAGCAACAGGTGTAATAACGTCGAATATACAATC
AGTACAAGCGAAAACAGAAGTAAAACAACAAAGTGAATCAGAGTTGAAACACTATTATAATAAACCGGTTTTAGAGCGTA
AAAATGTTACTGGATATAAATATACTGAAAAAGGTAAAGATTATATAGATGTTATAGTAGACAATCAATATTCTCAAATT
TCTTTAGTTGGATCTGATAAAGACAAATTTAAAGATGGAGACAACTCGAATATAGATGTGTTTATCCTTAGAGAAGGTGA
CAGTAGACAAGCAACAAATTACTCAATTGGTGGCGTTACAAAATCAAATAGTGTGCAGTATATTGATTATATCAATACGC
CAATTTTAGAAATCAAGAAAGGTAATGAAGATGTACTTAAAGATTTGTACTACATTTCAAAAGAAGACATCTCATTAAAA
GAACTTGATTATAGATTACGAGAACGTGCAATCAAACAACACGGCTTGTATTCAAACGGTCTTAAACAAGGTCAAATTAC
AATTACTATGAAAGATGGCAAATCACATACTATCGATTTAAGTCAAAAACTTGAAAAAGAGCGTATGGGCGACTCAATCG
ACGGCACTAAGATTGATAGAATTCTAGTAGAAATAAAATAA

Protein sequence : 
MKFKAIAKASLALGMLATGVITSNIQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQYSQI
SLVGSDKDKFKDGDNSNIDVFILREGDSRQATNYSIGGVTKSNSVQYIDYINTPILEIKKGNEDVLKDLYYISKEDISLK
ELDYRLRERAIKQHGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGDSIDGTKIDRILVEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set6 NP_370946.1 superantigen-like protein Virulence vSa¥á Protein 4e-92 92
set6 NP_373632.1 superantigen-like protein Virulence vSa¥á Protein 4e-92 92
SACOL0468 YP_185358.1 superantigen-like protein Virulence vSa¥á Protein 5e-93 89
set1nm YP_001331422.1 superantigen-like protein Virulence vSa¥á Protein 5e-93 89
SAUSA300_0395 YP_493109.1 superantigen-like protein Virulence vSa¥á Protein 5e-93 89
SAKOR_00404 YP_008490588.1 Exotoxin Virulence vSa¥á Protein 2e-92 89
SAR0422 YP_039874.1 superantigen-like protein Virulence vSa¥á Protein 1e-74 76
SAS0384 YP_042509.1 superantigen-like protein Virulence vSa¥á Protein 5e-70 71
set16 NP_645199.1 superantigen-like protein Virulence vSa¥á Protein 5e-70 71
SAMSHR1132_03720 YP_005324894.1 exotoxin Virulence vSa¥á Protein 4e-66 65
SAKOR_00417 YP_008490601.1 Exotoxin Not tested vSa¥á Protein 2e-39 47
SAR0435 YP_039886.1 superantigen-like protein Virulence vSa¥á Protein 1e-39 46
SACOL0478 YP_185368.1 superantigen-like protein Virulence vSa¥á Protein 3e-37 45
set11nm YP_001331434.1 superantigen-like protein Virulence vSa¥á Protein 3e-37 45
SAUSA300_0407 YP_493121.1 superantigen-like protein Virulence vSa¥á Protein 3e-37 45
set15 NP_370957.1 superantigen-like protein Virulence vSa¥á Protein 4e-39 45
set15 NP_373644.1 superantigen-like protein Virulence vSa¥á Protein 4e-39 45
set5nm YP_001331426.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-40 43
SAUSA300_0399 YP_493113.1 superantigen-like protein 5 Virulence vSa¥á Protein 5e-40 43
set3 YP_039879.1 superantigen-like protein 5 Virulence vSa¥á Protein 4e-40 43
set10 NP_370949.1 superantigen-like protein 5 Virulence vSa¥á Protein 8e-40 43
set10 NP_373636.1 superantigen-like protein 5 Virulence vSa¥á Protein 8e-40 43
SAS0388 YP_042513.1 superantigen-like protein 5 Virulence vSa¥á Protein 8e-40 43
set20 NP_645203.1 superantigen-like protein 5 Virulence vSa¥á Protein 8e-40 43
SAKOR_00409 YP_008490593.1 Exotoxin Virulence vSa¥á Protein 2e-40 43
SAS0396 YP_042522.1 superantigen-like protein Virulence vSa¥á Protein 3e-38 42
set26 NP_645211.1 superantigen-like protein Virulence vSa¥á Protein 3e-38 42
SAMSHR1132_03810 YP_005324902.1 exotoxin Virulence vSa¥á Protein 1e-33 41
SAS0389 YP_042514.1 superantigen-like protein Virulence vSa¥á Protein 2e-31 41
set21 NP_645204.1 superantigen-like protein Virulence vSa¥á Protein 2e-31 41