Gene Information

Name : ccrC (C248_0046)
Accession : YP_006708808.1
Strain : Staphylococcus aureus 08BA02176
Genome accession: NC_018608
Putative virulence/resistance : Unknown
Product : Recombinase CcrC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51231 - 52910 bp
Length : 1680 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGGTAAAATTGCACTTTATTCACGTGTTAGTACGTCTGAGCAGTCAGAACATGGTTATTCTGAAAAGGAGCAGGA
ACAACTACTCATCAAAGAAGTTATGAAAAATTTCCCAGGTTATGACTATGAGACATATACTGACTCAGGCATTTCAGGTA
AAAATATTGAAGGTCGTCCGGCAATGAAACGTCTATTACAAGATGTTAAGGATAATAAAATCGAAATGGTATTAAGTTGG
AAATTGAATCGTATTTCTCGCTCAATGAGAGACGTGTTTAATATTATTCATGAATTCAAAGAACATGACGTAGGGTATAA
ATCGATTTCTGAGAATATTGATACATCCAATGCTTCTGGAGAAGTACTCGTTACAATGTTTGGACTAATAGGATCTATAG
AACGCCAGACTTTGATTTCCAATGTGAAACTTTCTATGAATGCTAAGGCAAGGAGCGGAGAGGCAATCACCGGTCGTGTT
TTAGGCTACAAATTATCACTTAATCCATTGACACAGAAAAATGATTTAGTTATTGATGAAAATGAAGCTCATATTGTACG
GGAAATCTTTGATTTATATTTGAATCACAATAAAGGATTTAAAGCAATCACGACAATTCTAAATCAAAAAGGATATCGTA
CCATTAATCAAAAACCATTTTCAGTGTTTGGCGTGAAATACATTTTGAATAATCCAGTCTATAAAGGCTATGTCAGATTC
AATAATCATCAAAATTGGGCTGTTCAGCGAAGAAGTGGTAAAAGTGATAAAAATGATGTGATATTGGTCAAAGGTAAGCA
TGAAGCCATTATAAGTGAAGATGTATTTGATCAAGTTCATGAGAAACTAGCTTCTAAAAGTTTTAAACCGGGTCGACCTA
TTGGTGGAGATTTCTACTTACGTGGCCTTATTAAATGCCCAGAATGCGGAAATAATATGGTATGTCGACGGACGTATTAT
AAAACGAAAAAGTCCAAAGAACGCACAATCAAACGCTATTACATTTGTTCATTATTCAATCGCTCAGGAAGTTCTGCCTG
TCATAGTAATGCGATTAATGCTGAAGTCGTCGAACGCGTAATCAATGTTCATTTGAATCGTATTCTTTCACAACCTAATG
TTATTAAGCAGATTGCGTCAAGTGTGATAGAAGAACTGAAACAAAAGCATAGTAAACAAACAGAAATAAAATATGATATT
GATAGTCTAGAAAAACAAAAAGCAAAAGTTAAAACACAACAAGAACGATTATTGGAATTGTTCTTAGATGATGAAATGGA
TAGCGAAATGTTAAAAGCTAAACAAAGTGAAATGAATCAACAGTTAGAAGTATTAGACCAACAAATTAAAGAAGCAAAAC
AAGCAAATCAATCACAGGATGATATACCCAATTTTGATAAGTTAAAAGCACGACTCATTTTGATGATAACACGATTCAGT
GTGTACTTAAGAAAGGCTACACCCGAAGCTAAAAATCAACTTATGAAAATGTTAATTGATTCAATTGAAATTACGACAGA
TAAACAAGTAAAACTTGTAAGGTATAAAATTGATGAAAGTCTTATCCCTCAATCTTTGAAAAAAGATTGGGGGTCTTTTT
TTATACCTAAATTTAACTTTGTGATAAATGTCACAAAGAAAAATAGGATTGAAAATTTATCACTTTTACCACTTTTTTAG

Protein sequence :
MKGKIALYSRVSTSEQSEHGYSEKEQEQLLIKEVMKNFPGYDYETYTDSGISGKNIEGRPAMKRLLQDVKDNKIEMVLSW
KLNRISRSMRDVFNIIHEFKEHDVGYKSISENIDTSNASGEVLVTMFGLIGSIERQTLISNVKLSMNAKARSGEAITGRV
LGYKLSLNPLTQKNDLVIDENEAHIVREIFDLYLNHNKGFKAITTILNQKGYRTINQKPFSVFGVKYILNNPVYKGYVRF
NNHQNWAVQRRSGKSDKNDVILVKGKHEAIISEDVFDQVHEKLASKSFKPGRPIGGDFYLRGLIKCPECGNNMVCRRTYY
KTKKSKERTIKRYYICSLFNRSGSSACHSNAINAEVVERVINVHLNRILSQPNVIKQIASSVIEELKQKHSKQTEIKYDI
DSLEKQKAKVKTQQERLLELFLDDEMDSEMLKAKQSEMNQQLEVLDQQIKEAKQANQSQDDIPNFDKLKARLILMITRFS
VYLRKATPEAKNQLMKMLIDSIEITTDKQVKLVRYKIDESLIPQSLKKDWGSFFIPKFNFVINVTKKNRIENLSLLPLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99844.1 cassette chromosome recombinase C2 Not tested Type-V SCCmec Protein 0.0 100
ccrC2 BAG06212.1 cassette chromosome recombinase C2 Not tested Type-VII SCCmec Protein 0.0 100
SAPIG0050 YP_005732860.1 cassette chromosome recombinase C Not tested Type-V SCCmec Protein 0.0 99
ccrC YP_251971.1 casette chromosome site specific recombinase CcrC Not tested SCCmec Protein 0.0 98
unnamed BAB47672.1 site-specific recombinase Not tested Type-III SCCmec Protein 0.0 97
unnamed BAC53834.1 site-specific recombinase Not tested SRImec-III and SCCmec-III region Protein 0.0 97
unnamed ACL99832.1 cassette chromosome recombinase C8 Not tested Type-V SCCmec Protein 0.0 96
ccrC8 BAG06191.1 cassette chromosome recombinase C8 Not tested Type-VII SCCmec Protein 0.0 96
SAPIG0035 YP_005732845.1 cassette chromosome recombinase C7 Not tested Type-V SCCmec Protein 0.0 96
ccrC BAD24834.1 cassette chromosome recombinase C Not tested Type-V SCCmec Protein 0.0 95
SSP0046 YP_300136.1 cassette chromosome recombinase C Not tested SCC15305cap Protein 0.0 91