Gene Information

Name : C248_0310 (C248_0310)
Accession : YP_006709071.1
Strain : Staphylococcus aureus 08BA02176
Genome accession: NC_018608
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 348093 - 349298 bp
Length : 1206 bp
Strand : -
Note : -

DNA sequence :
ATGTGGATTGAAAAATTTAAAAACAAAAATAACGAAACTAAATACAGATATTACGAGAAGTACAAAGATCCATACACAGA
TAAATGGAAGCGCGTAAGTGTTGTGTTGAACAAGAATACAAAACAATCTCAAAAAGAAGCAATGTTTCGTTTAGAAGAAA
AAATAAAAGAAAAACTGAACAACAAGTCGTCAAGCGAATTAAAAACTTTGACTTTTCACGCGTTATTAGATGAATGGCTT
GAATATCATATAAAAACATCTGGCTTTAAAGTAACGACGCTTGATAATTTGAAAACAAGAATCAAAAACATCAAAAAGAA
CAGTTCTCAAAATTTACTTTTAAACAAAATTGATACAAAGTACATGCAAACATTTATTAACGAATTATCAAACGTATATT
CTGCAAATCAGGTAAAGCGTCAACTTGGACATATGAAAGAAGCTATTAAATACGCCGTTAAATTTTACAATTATCCAAAC
GAACACATATTAAATAGCGTCACACTACCAAAGAAGAGTAAGACGATAGAAGATATAGAAAAAGAAGAAGCGAAAATGTA
CAACTATTTAGAGATGGAACAGGTAATACAGATACGCGATTTTATACTGAACGATAATAACATGCAGTATAGAGCTCGTA
TTTTAGTTGCTGGGGCTGTTGAAGTTCAAGCTTTAACAGGTATGCGCATAGGTGAGTTATTAGCGCTCCAAGTTAAAGAT
GTAGACCTCAAAAATAAAACGATCGATATTAATGGCACTATTCACAGAATCAAATGTAATGCTGGATTTGGTCACAAAGA
TACTACGAAGACCGCAGGTTCAAAAAGAAAAATCGCTATCAATTCAAGGATAGCAAATGTATTGAAAAAAATAATGTTAG
AAAATAAAAAGATGCAACAATGGGAACCAAGCTATGTTGATAGAGGGTTTATATTCACAACTTGCCAAGGAAATCCTATG
CAAGGCAGTAGGATAAACAAACGATTGTCCTCAGCTGCAGAATCATTAAATATAAATAAAAAAGTTACTACTCACACACT
AAGGCATACACACATAAGTTTATTGGCGGAAATGAATATATCGTTAAAAGCAATTATGAAAAGAGTAGGACATACAGATG
AAAAAACGACTATAAAGGTGTATACACATGTAACAGAGAAAATGGACAGAGAGTTAGAGCAAAAATTAGAAAAACTTGTG
TACTAA

Protein sequence :
MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLNNKSSSELKTLTFHALLDEWL
EYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPN
EHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPSYVDRGFIFTTCQGNPM
QGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLV
Y

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0274 YP_005735791.1 putative prophage integrase Not tested ¥ÕSa1 Protein 1e-175 98
int NP_646259.1 integrase Not tested ¥ÕSa2 Protein 3e-137 77
SAUSA300_1438 YP_494135.1 phiSLT ORF401-like protein, integrase Not tested ¥ÕSa2 Protein 1e-137 77
int AAC28969.1 integrase Not tested SaPI1 Protein 4e-79 49
int AAL04148.1 integrase-like protein Not tested SaPI3 Protein 3e-77 48
SACOL0885 YP_185756.1 pathogenicity island protein, integrase Not tested vSa1 Protein 4e-77 48
int YP_493499.1 integrase Not tested SaPI5 Protein 6e-77 48
SAAV_0787 YP_003281710.1 pathogenicity island protein, integrase Virulence SaPIAv Protein 1e-75 47
SAR0366 YP_039823.1 integrase Not tested SaPI4 Protein 7e-66 43