|
Name : hlgB (C248_2469) Accession : YP_006711157.1 Strain : Staphylococcus aureus 08BA02176 Genome accession: NC_018608 Putative virulence/resistance : Virulence Product : gamma-hemolysin component C Function : - COG functional category : - COG ID : - EC number : - Position : 2463081 - 2464058 bp Length : 978 bp Strand : + Note : - DNA sequence : ATGAACATGAATAAATTAGTCAAATCATCCGTTGCTACGTCTATGGCATTATTATTACTTTCTAATACTGCAAATGCTGA AGGCAAAATCACACCAGTTAGCGTCAAAAAAGTAGATGATAAAGTTACTTTATACAAAACTACAGCTACAGCAGATTCAG ATAAATTCAAAATTTCACAGATTTTAACATTCAATTTCATCAAAGATAAAAGTTATGATAAAGATACTTTAGTGCTTAAA GCTGCAGGTAATATTAACTCAGGTTATGAAAGACCAAATCCTAAAGACTACGACTTTTCAAAAATATATTGGGGTGCAAA ATACAATGTGTCTATCAGTTCACAATCTAATGATTCGGTTAACGTAGTAGACTATGCACCTAAAAATCAAAATGAAGAAT TTCAAGTTCAAAACACTTTAGGATATACATTCGGTGGTGACATCAGTATCTCTAATGGTTTATCTGGCGGACTTAACGGA AACACTGCTTTTTCTGAAACAATAAATTATAAACAAGAAAGTTACAGAACAACATTAAGTCGCAACACAAATTATAAAAA TGTTGGCTGGGGAGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCTTATGGAAGAGATAGCTTCCACCCAACAT ATGGTAATGAACTCTTCTTAGCTGGCAGACAAAGCAGTGCATACGCTGGCCAAAACTTCATAGCGCAACACCAAATGCCA TTATTATCTAGAAGTAACTTCAATCCAGAATTTTTAAGCGTACTATCACACAGACAAGATGGCGCTAAAAAATCTAAAAT TACAGTAACTTATCAACGTGAAATGGATTTATACCAAATTCGTTGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAA ACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAA ACTGAAAACAATAAATAG Protein sequence : MNMNKLVKSSVATSMALLLLSNTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK AAGNINSGYERPNPKDYDFSKIYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMP LLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKE TENNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 3e-104 | 77 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 2e-104 | 77 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 2e-104 | 77 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 2e-104 | 77 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 2e-104 | 77 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 3e-104 | 77 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 3e-104 | 77 |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 2e-92 | 73 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 2e-92 | 73 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 2e-90 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgB | YP_006711157.1 | gamma-hemolysin component C | VFG1275 | Protein | 4e-128 | 98 |
| hlgB | YP_006711157.1 | gamma-hemolysin component C | VFG1276 | Protein | 7e-93 | 73 |
