Gene Information

Name : C248_1190 (C248_1190)
Accession : YP_006709930.1
Strain : Staphylococcus aureus 08BA02176
Genome accession: NC_018608
Putative virulence/resistance : Virulence
Product : Alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1189126 - 1190085 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCTATATTAATGAATCCTGTCGCTAATGCCGC
AGATTCTGATATTAATATTAAAACCGGTACTACAGATATAGGAAGCAATACTACAGTAAAAACAGGTGATTTAGTCACTT
ATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAAATATTAGTC
ATCAGAACGAAAGGTACCATTGCTGGTCAGTATAGAGTTTATAGCGAAGAAGGCGCTAATAAAAGCGGTTTAGCCTGGCC
TTCAGCATTTAAGGTACAGTTGCAACTATCTGATAATGAAGTAGCACAAATTTCTGATTACTACCCTAGAAATTCAATTG
ATACTAAAGAATATATGAGTACATTAACTTATGGATTCAACGGTAACGTGACTGGTGATGATTCTGGAAAAATTGGCGGT
TTGATTGGTGCAAATGTTTCAATTGGTCATACGCTCAAATATGTTCAACCAGATTTCAAAACAATTTTAGAAAGTCCAAC
TGATAAAAAAGTAGGTTGGAAAGTTATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGACAGAGATTCTTGGA
ACCCAGTATACGGCAATCAACTTTTCATGAAAACAAGAAACGGTTCAATGAAAGCAGCAGATAACTTCCTTGATCCTAAC
AAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGCATCCAAACA
ACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTACCAATTGCATTGGACTTCAACAAATTGGAAAGGTA
CCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence :
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKILV
IRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLSDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDSGKIGG
LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPN
KASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-143 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 4e-144 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 4e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 4e-144 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-143 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 3e-144 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C248_1190 YP_006709930.1 Alpha-hemolysin VFG1293 Protein 2e-144 99