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Name : lysS (B2904_orf1273) Accession : YP_006707358.1 Strain : Brachyspira pilosicoli B2904 Genome accession: NC_018607 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1316481 - 1318013 bp Length : 1533 bp Strand : + Note : - DNA sequence : ATGTCAGAAAATCAAAATAATTCTGAAAATACACAAAATGAAAAAAATAGCAGTGTAGAAAAAAATGCAGAAAAAGAAAA CAGAAAAGAGAAATTAAACACATTAAGAAATATGGGAATTAATCCATTTCCAAATAGTTATGATGTAACTTATAAATCAA AGGATATAGCAGAGCAATTTGAAGAACTTGAAAAGAATGAAACAGAAGTTGCTGTTGCTGGAAGAATAATGCTTTATAGG GTAATGGGTAAATCTTCATTTTTAACTATAAAAGATTCTAAAGGCACTATTCAAGCATATATACAAAAAGATAAACTTGG TGATGAGTTTTATAATACAGTATTCAAAAAGCTTATAGATATAGGTGATATTGTAGGAGTAAAAGGAACTGTATTTAAAA CCAAAACAGGTGAAATTACAATATATGCAAGCGAATTAAAACTTCTTACAAAATCATTAAATCCGCTTCCTGAAAAATTT CATGGTTTAACAGATACAGAGCTTCGCTACAGACAAAGATATGTTGATTTAATAATGAATGATGATGTTAAAGAGGCTTT TATTAAACGCTCTAAAATGATATCTGCTATAAGAGAAATAATGATAGAGAATAATTTTCTTGAAGTAGAAACTCCTATGA TGCATCCATTAATTGGAGGAGCTAAGGCAAAACCATTTGTTACGCATCATAATACTTTAGATATGACACTTTATTTAAGA ATAGCACCTGAACTTTATTTGAAAAGACTTATAGTTGGAGGTTTTGATAAAGTATTTGAGCTTAATAGAAATTTCCGTAA TGAAGGTATATCTACAAGACATAATCCAGAGTTTACTATGATGGAAGCATATATGGCTTATGCTAATTTCCACAAGGTTA TGGAATTGGTAGAAGAGGTGTTCTCTAAAGTATGTTTCAAATTAAATGGAAAATACACTTCTCAGTATAAAGATTATGAG ATTAACTTTAAGCCTCCATTTGCAAGAGTACCTATGGTTGATTTAGTTAAAGAGCATTCTGGACTTGACTTTAATTCTAT ACAATCAGATGATGAAGCTATATCAAAAACAAAATCAATAGGTGTAGAGATAGATACTTCAAAAGGTAAGCCTACTAAAT GGGAAGTTATGGTTGCTGTATTTGAAGAGAAAGTTGAAGAAAAACTTATTCAGCCTACATTTGTTATTAATTATCCTAAA GCAGTTTCTCCGCTTTCAAAATCTTATCCTGATAATCCAGACATTACAGAGAGATACGAACTCTTTATTGGCGGAATGGA GATGTCTAATGGTTTTAGTGAGCTTAATGACCCAATAGACCAAAAAGAGCGTTTTGAGGAGCAATTAAAAGCAAAAGCTC GCGGTGAAGATGAAACTATGGATATGGATTTAGATTTTATCAATGCATTAGAATATGGGCTTCCTCCTACAGGCGGACTT GGCATAGGAATAGATAGAATGGCTATACTTTTCCTAAATGTGCCTAGCATTAGAGACACTATTCTTTTCCCTCAGATGAG AAAGTTAGAATAG Protein sequence : MSENQNNSENTQNEKNSSVEKNAEKENRKEKLNTLRNMGINPFPNSYDVTYKSKDIAEQFEELEKNETEVAVAGRIMLYR VMGKSSFLTIKDSKGTIQAYIQKDKLGDEFYNTVFKKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKF HGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLYLR IAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYE INFKPPFARVPMVDLVKEHSGLDFNSIQSDDEAISKTKSIGVEIDTSKGKPTKWEVMVAVFEEKVEEKLIQPTFVINYPK AVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQLKAKARGEDETMDMDLDFINALEYGLPPTGGL GIGIDRMAILFLNVPSIRDTILFPQMRKLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-109 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006707358.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-109 | 51 |
