|
Name : serS (CAHE_0510) Accession : YP_006705707.1 Strain : Cardinium endosymbiont cEper1 Genome accession: NC_018605 Putative virulence/resistance : Unknown Product : Serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 532237 - 533508 bp Length : 1272 bp Strand : - Note : - DNA sequence : ATGATTGAGTTACATCGTATAAGAACAGACAAAGAAGCAGTAATAAATGGCTTACATCAGCGAGGTGTATCTAATGCAGA AGAGCTTATTCAAGCCATATGCAACCTGGACATAGAAAAACGGGCCATACAATTTCAATTAGACAACTTATCCGCTACAC TCAATAAGCTAAATCAGGAAATAGCAGATCTCTTGCGCAAAAACGATGGAGCTGCTCCGTTAGAAGCAAAAAAAGAAGAA AGCAACCAATTAAAAAAAAGCATTAAGCAGTTGGTAGAGAAATTTAAAGCACATGCATTAGATCTATTGGTGCAGCTTTA TGCGCTTCCAAACTTGCCTCATGAAAGCGTACCAGTAGGGAGCCATGCTGATCATAATCTTATTATTTATCAAACGTCAC GAATGGTTGTAAAAGGGCCTTTGGCCCATTGGGATTTGGTTAAAAAATATGACTTAGTTGACTTTGAGTTAGGCAATAAA ATTACCGGTGCTGGTTTCCCAGTATATAAGGGAAAAGGTGCTAGGTTACAACGTGCTTTAATCAACTTTTTTTTGGATCA AGCATTAAAAGCAGGCTATACCGAAATTCAACCTCCTATTTTGGTAAATGAAGCATCTGCCTATGCAACGGGTCAACTCC CTGACAAAGAAGGCCAGATGTATCAAATTGGATCCACACCATTATATCTAATACCTACTTCAGAAGTCTCCATCACCAAT ATCTATCGTGATGCCATTATAGCAGAGACTGCTCTACCCATTAAACATGTAGGGTATACACCCTGCTTTAGAAGAGAAGC AGGCTCTTGGGGCGCTGACGTACGCGGACTGAATAGGTTGCATCAATTTGATAAGGTAGAATTGGTTCAGATTGCCCATC CGGACGCTTCTTACGCAAACTTAGAAGAAATGTTAACCTATGTACAAGGATTGGTGGAACACCTGGCGCTACCTTACCGT GTTCTAAAGCTTTGTCATGGAGATTTAGGGTTTTGTGCTGCTATGACCTATGACATAGAGGTGCATGCCATAGGTCAAGA TAAATGGCTAGAAGTGAGCTCAATTAGCAATTTTGAAACCTTCCAATCCAATAGGTTGTCCTTAAGATATAAGGATAAAA CCAAAAAAACTTGTCTTTTACATACCTTAAATGGCAGTGGGCTGGCCCTTCCACGTGTACTAGCTGCACTGTTGGAATTA AATCAAACCCCAGAGGGGATCCGTATTCCAAAGGTCTTACAACCTTATACAGGATTTGATATAATCGACTAA Protein sequence : MIELHRIRTDKEAVINGLHQRGVSNAEELIQAICNLDIEKRAIQFQLDNLSATLNKLNQEIADLLRKNDGAAPLEAKKEE SNQLKKSIKQLVEKFKAHALDLLVQLYALPNLPHESVPVGSHADHNLIIYQTSRMVVKGPLAHWDLVKKYDLVDFELGNK ITGAGFPVYKGKGARLQRALINFFLDQALKAGYTEIQPPILVNEASAYATGQLPDKEGQMYQIGSTPLYLIPTSEVSITN IYRDAIIAETALPIKHVGYTPCFRREAGSWGADVRGLNRLHQFDKVELVQIAHPDASYANLEEMLTYVQGLVEHLALPYR VLKLCHGDLGFCAAMTYDIEVHAIGQDKWLEVSSISNFETFQSNRLSLRYKDKTKKTCLLHTLNGSGLALPRVLAALLEL NQTPEGIRIPKVLQPYTGFDIID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-70 | 43 |
