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Name : lysS (CAHE_0013) Accession : YP_006705215.1 Strain : Cardinium endosymbiont cEper1 Genome accession: NC_018605 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 12810 - 14333 bp Length : 1524 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2183178, 7473706; Product type e : enzyme DNA sequence : ATGCAGGAGCTGAATGAACAAACCACCATTCGAATACAGAAAAAAGACCGCTTAGAATCTATGGGGATCAATCCCTATCC AGGTTCTGTTCACCCCATCAATGCCAAAGCAGCCACTATTCTTTCCGATTACAAAGAAGCAGATAAAGCAAACTATAGCC ACCTAGTACTGGCAGGCCGGATTATGGGACGTAGAATTATGGGAAAGGCTTCGTTTGTAGAATTACAAGATGCAAGTGGG CGGATTCAACTCTATGTACAAAGAGATTCCATTTGTCCAGGAGAAGACAAAAGCCACTACAATATCTTCTTTAAGAAATT ACTTGACATAGGTGACATCATTGAAATCCAAGGTTTTGTCTTTACAACGCAAGTGGGTGCCATAGCGGTGCATGTGACCC ATCTTCGGCTGTTAACCAAGGCACTTAGCCCTCTACCAATTGTCAAAGAAGTATCGACCAAAGAAGGTGGGAAAGTATAT GATGCCTTCACAGATCCTGCACAACGGTATCGTCAAAGATATGTTGATTTAATCGTGAATCCAGCAGTACGCAAGGTATT TGAACAACGGGCGAAGTTGATCCACACGATGAAAGCCTCCTTGCAGGATAAAGGATACCTAGAAGTGGAAACCCCTATTC TGCAACCCATTTATGGAGGCGCATCGGCACGCCCCTTTATCACACACCATCATACCCTAGATATCCCCTTATATTTACGG ATCTCTAATGAGCTTTATTTAAAGCGGTTAATTATTGGGGGCTATGAGGGTGTCTACGAATTTGCAAAAGATTTTAGAAA CGAAGGCATGTCCCGCTTCCACAACCCAGAATTTACCCAAGTAGAACTTTATGTGGCCTATAAAGACTACATCTGGATGA TGGACTATGTAGAAGAATTATTAGAAGGAGTCGCACTAGCCCTACATGGGACTACAACGGTTCCGTTTGGTACAGATTTG ATTAACTTTCAACGGCCATGGAAACGGTTTACGATGTTTGAGGCGATTCACCATTTTACGGGACATGATGTAAGCCATAT GGATGAGGCGGCCTTGCGCAGAGTGGCCCATCAATTGGCTATAGATATAGCAGATAACTTTGCCAAAGGTAAAATTATAG ATGAAATTTTTGGCGCGAAATGTGAACCACATTTTATTCAACCTACTATTATAACCGACTACCCCGTTGAAATGTCTCCT TTGGCGAAACGACATCGCACCAATCCAGCTTTAACCGAACGATTTGAGGTAATATGCGCAGGTAAAGAAATCTGCAATGC TTTTTCTGAGTTAAATGATCCGATTGATCAACAGAAAAGATTAGAGGCACAACGTAAACTAGGCGAACGGGGTGATGAAG AAGCGATGGTGGTAGACCATGATTTTTTAAAAGCTTTGCGCTATGGCATGCCCCCAACAGTAGGTATTGGCATAGGGATA GATCGGCTAACGATGATCATGACCAATGTGCCATCTATTCAAGATGTCCTATTTTTTCCACAAATGCGTCCTGAAAATCC ATAA Protein sequence : MQELNEQTTIRIQKKDRLESMGINPYPGSVHPINAKAATILSDYKEADKANYSHLVLAGRIMGRRIMGKASFVELQDASG RIQLYVQRDSICPGEDKSHYNIFFKKLLDIGDIIEIQGFVFTTQVGAIAVHVTHLRLLTKALSPLPIVKEVSTKEGGKVY DAFTDPAQRYRQRYVDLIVNPAVRKVFEQRAKLIHTMKASLQDKGYLEVETPILQPIYGGASARPFITHHHTLDIPLYLR ISNELYLKRLIIGGYEGVYEFAKDFRNEGMSRFHNPEFTQVELYVAYKDYIWMMDYVEELLEGVALALHGTTTVPFGTDL INFQRPWKRFTMFEAIHHFTGHDVSHMDEAALRRVAHQLAIDIADNFAKGKIIDEIFGAKCEPHFIQPTIITDYPVEMSP LAKRHRTNPALTERFEVICAGKEICNAFSELNDPIDQQKRLEAQRKLGERGDEEAMVVDHDFLKALRYGMPPTVGIGIGI DRLTMIMTNVPSIQDVLFFPQMRPENP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-91 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006705215.1 | lysine--tRNA ligase | VFG1668 | Protein | 3e-91 | 46 |
