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Name : clpB (WESB_0993) Accession : YP_006703550.1 Strain : Brachyspira pilosicoli WesB Genome accession: NC_018604 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1075986 - 1078565 bp Length : 2580 bp Strand : - Note : - DNA sequence : ATGGATTATAATAAATATACAATAAAAGCCCAAGAGGCAGTAAATGAAGCTGCTAATATAGCTAATGGTGAAGACCATAA TGAAATAAAAAGCGAGCATTTACTTCTTGCATTATTAAAACAAGAGGACGGACTTATTCAGCCTTTAGTAGAAAGAATAG GCATTCCTATAAATACGTTAATAGATAAAACTCAAAGATTAGTTGATGAAAATGTAAAGGTAACAGGAGAAAATGTGCAG TTACATCTCTCTACTAATGCCGGTAAAGTTTTAGCAAAAGCAGAAAAAGAAGCTAATGCTTTAAAAGACCAATATGTATC AACAGAGCATATATTCTTAGCACTTGTTGAAGCTGACAACAAAGCAGGCGACATGCTTAGAAAAAGCGGAATAAGTAAAA AAGAAGTTTTAAGTGCATTAAAAGATTTAAGAAAAGGTCAAAGCGTAAATAGCCAAGACCCAGAAGCAAAAATGCAGGCA CTTGATAAATACTGCCGTGATTTAACAGCATTAGCAGAAGCAGAAAAAATTGACCCTGTTATAGGACGTGATGAAGAGAT AAGACGTGTTATGCAGGTATTGTCAAGAAGAACTAAAAATAACCCTGTGCTTATAGGTGAGCCTGGTGTTGGTAAGACTG CTATTGTTGAAGGACTTGCAAGAAGAATAGTTTCTCAAGATGTACCTGAGGGACTTAAAGATAAAAGGCTATTAGCTTTA GATTTAGGTGCATTAGTAGCTGGTGCAAAATTCAGAGGAGAGTTTGAAGAGAGATTAAAAGCTGTTATCACAGAGATAGA AAAATCTGAAGGAAGCATTATATTATTTATAGATGAGCTTCACACACTTGTAGGAGCTGGTGCTACAGAGGGAGCAATGG ACGCTTCTAACCTATTAAAACCTGCATTAGCAAGAGGCGAATTAAGAGCAATAGGTGCTACTACTTTAGATGAATATAGA AAATATATTGAAAAAGATAAAGCACTTGAGAGAAGATTCCAACAGGTTTATTGTAAAGAGCCTAGTGTTGAAGATACTAT TTCAATACTTAGAGGCCTAAAAGATAAATACGAAGTTCATCATGGTGTAAGGATAAAAGACGATGCATTAGTTGCTGCTG CTGTTTTATCCAACAGGTATATAACTAACAGATTCTTACCAGACAAAGCTATTGACTTGGTAGATGAAGCTGCTAGCCAA TTAAAAATAGAGATAGACAGTCAGCCTACTGAACTTGATAAAATAGAGAGAAAGATTTTACAGCTTAATATAGAAAAACA AGCTCTTTCAAAAGAAAATGATGCAGCATCTAAAGAGAGATTAGAAAAACTTGAAAAAGAATTATCTGAACTTTCTGAAG AGCGTAATGCTATGAAACTTCAATGGGATAATGAAAAAGGAAGAATTGAAGAGACTAGAAAATTAAAAGAAGAACTTGAA GCTTTAAATATAAAAGAGACTCAATATACAAGAGAAGGTAATTTAGCAAAGGCTGCTGAAATAAAATATGGTAAAATACC AGAACTTCAGAAAAAATTAGAAGAAGCAACTAAGGCTATGGAAGAAGCTAAAAACTCTGACAAGAAAGGTCTTTTAAGAG AAGAGATTTCTGAAGATGATATAGCTAGAGTAATATCTGTATGGACTGGAATACCTGTAAGTAAAATGCTTACAAGCGAA AAACAAAAATACTTACAGCTTGAAGAAGTGCTGCATAAAAGAGTTGTAGGACAAGATGAAGCTATCACTTCAGTTGCTGA CGCAATAAGAAGAAACAGAGCAGGACTTTCTGATGAAAACAAACCTCTTGGAAGTTTCTTATTTATAGGACCTACTGGAG TTGGTAAAACTGAGCTTGCTAAGACTCTTGCTGATTTCTTGTTTAGCGATGAAAAAGCTTTAACAAGAATTGATATGAGT GAGTATATGGAGAAGTTTTCTGTTACTAGACTTATAGGAGCTCCTCCTGGATATGTAGGTTATGATGAAGGAGGACAATT AACAGAAGCAGTTAGAAGAAGACCTTATTCTGTTATACTATTTGATGAGATAGAAAAAGCTCACCCTGATGTATTTAATG TTTTACTTCAGGTGTTAGATGACGGAAGACTTACTGACGGACAAGGAAGAATAGTAGATTTCAAAAATGCTATTATCATA ATGACAAGTAATTTGGGTTCTGACCTTATTCTTGAAGCTAATGATACTAATGATATCAAAGAAAAAATTCAAGAGTTACT AAAAATGTCATTTAGACCAGAGTTCTTAAACAGAATAGATGAGATAATAACATTTACTAGACTTGACAAAAAATACATTG CTGAGATAGTAAGAAATCAAATAGCAAGAGTTGCTAACAGACTTAAAGATAGAAGAATAACTTTAGATGTAAGCGATGAA GCTATAGACTATATTGCTGATATTGGTTATGACCCTCAGTTTGGAGCAAGACCATTAAAAAGAGCAATACAGAATTATAT AGAAAACCCACTAGCTAAAGAAATGTTAGCGGGCAAATATTTAGAAGGAGATACTATAAAAGTTATTAAATCAGGAGACG GTTTGGTTTTTGAAAAATAA Protein sequence : MDYNKYTIKAQEAVNEAANIANGEDHNEIKSEHLLLALLKQEDGLIQPLVERIGIPINTLIDKTQRLVDENVKVTGENVQ LHLSTNAGKVLAKAEKEANALKDQYVSTEHIFLALVEADNKAGDMLRKSGISKKEVLSALKDLRKGQSVNSQDPEAKMQA LDKYCRDLTALAEAEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSQDVPEGLKDKRLLAL DLGALVAGAKFRGEFEERLKAVITEIEKSEGSIILFIDELHTLVGAGATEGAMDASNLLKPALARGELRAIGATTLDEYR KYIEKDKALERRFQQVYCKEPSVEDTISILRGLKDKYEVHHGVRIKDDALVAAAVLSNRYITNRFLPDKAIDLVDEAASQ LKIEIDSQPTELDKIERKILQLNIEKQALSKENDAASKERLEKLEKELSELSEERNAMKLQWDNEKGRIEETRKLKEELE ALNIKETQYTREGNLAKAAEIKYGKIPELQKKLEEATKAMEEAKNSDKKGLLREEISEDDIARVISVWTGIPVSKMLTSE KQKYLQLEEVLHKRVVGQDEAITSVADAIRRNRAGLSDENKPLGSFLFIGPTGVGKTELAKTLADFLFSDEKALTRIDMS EYMEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNAIII MTSNLGSDLILEANDTNDIKEKIQELLKMSFRPEFLNRIDEIITFTRLDKKYIAEIVRNQIARVANRLKDRRITLDVSDE AIDYIADIGYDPQFGARPLKRAIQNYIENPLAKEMLAGKYLEGDTIKVIKSGDGLVFEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006703550.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 2e-105 | 42 |
| clpB | YP_006703550.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2076 | Protein | 3e-109 | 41 |
