Gene Information

Name : metC-1 (LMOSLCC7179_1652)
Accession : YP_006699345.1
Strain : Listeria monocytogenes SLCC7179
Genome accession: NC_018593
Putative virulence/resistance : Resistance
Product : cystathionine beta/gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1679985 - 1681157 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAAAGAATACGCGCAAGATACGGCTGTAATTAAAGCGAGCCTCGGGATTGATAAAGAAACAGGTGCGCTTAATAC
GCCGATTCATTTATCTTCTACTTTCCATCAACATGATTTTGATAACTACCATGCTTATGATTATGCAAGAAGTGGAAACC
CAACCAGGGGAAAAGTGGAACAGGCGATTGCAGAATTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGAATGGCG
GCTGTTTCTGCGGCACTTTTTACGCTTTCAAAAGGAGATCATTTTATTATTGCAAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAACAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACAACAAATATTGACGAGGTTGCTAAGG
CGTTTCAAGCAAATACAAAATTGGTTTATTTGGAAACTCCTTCTAATCCGCTGCTACATGTGACGGATATTCGCACAGTT
GCTAAACTTGCGAAAGCGAATGGTTGCTATACATTTGTCGATAATACATTTTTAACGCCGCTGATTCAAAAACCGTTAGA
ATTAGGTGCGGACTTAGTTATCCATAGTGCGACGAAATTTCTTGGTGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAATCTTGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACGGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTTGCGGTGCATTATCCGGGGTTACCGTCGCATGCGGGGTATGACATTCAAGTGGAACAGG
CGACAAGCGGCGGGGCTGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTCTAGGTGCGGTCGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAACGTTTGGCGCAAGGGATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCTGAAGACTTGATTG
CAGATTTAAAACAAGCACTTTCATTCATTAAGAAGGGAAGTGTTGCGAAGTGA

Protein sequence :
MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTRGKVEQAIAELEGGTNGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-76 49
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-75 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-75 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC-1 YP_006699345.1 cystathionine beta/gamma-lyase BAC0207 Protein 2e-54 43