Gene Information

Name : LMOSLCC5850_0418 (LMOSLCC5850_0418)
Accession : YP_006695245.1
Strain : Listeria monocytogenes SLCC5850
Genome accession: NC_018592
Putative virulence/resistance : Virulence
Product : HTH domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 437854 - 438057 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
TTGAAAGTCCGTAATAAAGTGAAACAGTTGCGTGAAGAAAGAGGAATCGGGCAAAATGAATTAGCTTTAGCATTAGAAGT
TTCGAGACAAACAATCCATGCTATCGAAAAAGGTAAATATAATCCTAGTTTAGAGCTAAGTTTGAAGATGGCACGCTATT
TTCGTTTAACAATAGAAGAGATTTTTCAACTGGAGGAGAATTAG

Protein sequence :
MKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSLELSLKMARYFRLTIEEIFQLEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-11 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-11 54
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 6e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC5850_0418 YP_006695245.1 HTH domain-containing protein VFG2175 Protein 9e-12 54
LMOSLCC5850_0418 YP_006695245.1 HTH domain-containing protein VFG2168 Protein 9e-12 54