Gene Information

Name : pdxS (LMOSLCC5850_2163)
Accession : YP_006696990.1
Strain : Listeria monocytogenes SLCC5850
Genome accession: NC_018592
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 2180458 - 2181345 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGGAGAAAAAAGTTGGTACAGATCGTGTAAAACGTGGTATGGCACAAATGCAAAAAGGCGGCGTCATTATGGACGTTGT
TAATGCTGAACAAGCAAAAATCGCTGAAGAAGCTGGTGCTGTTGCAGTTATGGCGCTTGAACGGGTTCCTTCTGATATTC
GCGCAGCTGGTGGTGTCGCTCGTATGGCCGATCCTCGCATTGTCGAAGAAGTAATGAACGCTGTCTCTATTCCCGTAATG
GCAAAAGCACGTATTGGTCATATTACAGAAGCTCGCGTCCTTGAAGCAATGGGCGTGGATTATATTGACGAAAGTGAAGT
ATTAACTCCCGCCGATGATGAATTCCATTTATTAAAATCAGATTTCACCGTTCCTTTCGTATGTGGTTGCCGAGATATCG
GTGAAGCGCTCCGCCGTATCGGTGAAGGTGCTGCCATGCTCCGTACAAAAGGAGAACCTGGAACTGGTAATATCGTCGAA
GCTGTTCGTCATATGCGCCAAGTAAACGGTCAAATCCGCCAAATCGCGGGAATGACGGATGATGAGTTAATGGTTGCTGC
TAAAAACTTCGGTGCTCCATATGAATTAATCAAAGAAATTAAAACACTCGGCAAACTTCCGGTCGTTAATTTTGCTGCTG
GTGGTGTTGCAACTCCCGCTGATGCCGCACTAATGATGGAACTTGGAGCAGACGGTGTTTTCGTTGGATCAGGTATTTTC
AAATCCGATAACCCTGCCAAATTTGCCAGTGCGATTGTTCAAGCCACTACCTACTACACAGACTATGAATTAATCGGAAA
ACTTTCCAAAGAGCTAGGTTCCCCGATGAAAGGAATCGAAATGTCTCGCCTTAACCCAGAAGACAGAATGCAAGATCGGA
GTTTTTAA

Protein sequence :
MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVM
AKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVE
AVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF
KSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPMKGIEMSRLNPEDRMQDRSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-81 63
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-81 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-80 63