Gene Information

Name : metC-1 (LMOSLCC5850_1742)
Accession : YP_006696569.1
Strain : Listeria monocytogenes SLCC5850
Genome accession: NC_018592
Putative virulence/resistance : Resistance
Product : cystathionine beta/gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1736454 - 1737626 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAAAGAATACGCGCAAGATACGGCTGTAATTAAAGCGAGCCTCGGGATTGATAAAGAAACAGGTGCGCTTAATAC
GCCGATTCATTTATCTTCTACTTTCCATCAACATGATTTTGATAACTACCATGCTTATGATTATGCAAGAAGTGGAAACC
CAACCAGGGGAAAAGTGGAACAGGCGATTGCAGAATTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGAATGGCG
GCTGTTTCTGTGGCACTTTTTACGCTTTCAAAAGGAGATCATTTTATTATTGCAAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAACAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACAACAAATATTGACGAGGTTGCTAAGG
CGTTTCAAGCAAATACAAAATTGGTTTATTTGGAAACTCCTTCTAATCCGCTGCTACATGTGACGGATATTCGCACAGTT
GCTAAACTTGCGAAAGCGAATGGTTGCTATACATTTGTCGATAATACATTTTTAACGCCGCTGATTCAAAAACCGTTAGA
ATTAGGTGCGGACTTAGTTATCCATAGTGCGACGAAATTTCTTGGTGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAATCTTGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACGGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTTGCGGTGCATTATCCGGGGTTACCGTCGCATGCGGGGTATGACATTCAAGTGGAACAGG
CGACAAGTGGCGGGGCTGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTCTAGGTGCGGTCGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAACGTTTGGCGCAAGGGATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCTGAAGACTTGATTG
CAGATTTAAAACAAGCACTTTCATTCATTAAGAAGGGAAGTGTTGCGAAGTGA

Protein sequence :
MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTRGKVEQAIAELEGGTNGFAFASGMA
AVSVALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-82 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-80 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC-1 YP_006696569.1 cystathionine beta/gamma-lyase BAC0207 Protein 3e-59 43