Gene Information

Name : LMOSLCC5850_1272 (LMOSLCC5850_1272)
Accession : YP_006696099.1
Strain : Listeria monocytogenes SLCC5850
Genome accession: NC_018592
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1249389 - 1250540 bp
Length : 1152 bp
Strand : +
Note : -

DNA sequence :
ATGACTATCAAATTAAAAAACAACCTTGTAAATTACGAGGAAAAACGAACAGCTTTTGTTAATGCTGTTAAAAACGAAGA
GACACAAGAAATTCAAAACAAGGCTTATGTGGAAATGGTAGATGCCATGGCTGCTGATATCATGGACCAAGCTAAAAAAG
AAGCGCGTCAAGAGGCGGACCAGTATATTTCAGCTAGCCGAACAGACAAAAATATCACGAATGAAGAAATTAAATTCTTC
AATGATATTAATAAAGAAGTTGGTTACAAAGAAGAAACATTGCTACCACAAACAGTCGTTGATGAAATCTTTGAAGATTT
AACAACTGAACATCCTTTCCTTGCATCTATTGGAATGCGCACGACTGGTTTACGTACTAAGTTCTTAAAATCCGAAACTA
GTGGCCTTGCTGTATGGGGCAAAATCTTTGGTGAAATCAAAGGACAATTGGATGCTACATTCAGTGAAGAAGAATCTATC
CAGAATAAATTAACCGCTTTTGTAGTAGTTCCTAAAGACCTTGAAAATTTTGGACCTGTATGGGTGAAACGTTTTGTAGT
TACTCAAATTGAAGAAGCGTTCGCAGTGGCGTTAGAAAGCGCGTTTATTATTGGTGATGGTAAAGATAAGCCTGTTGGTC
TAACTCGCAAAGTTGGAAAAGGGACTAACGTAGTAGATGGTGTATATCCAGAAAAAGTTGCATCCGGAACACTGACATTT
GCTAGCTCTAAGGTAACTGTTAATGAATTAACAGATGTATATAAATATCATTCCGTAAAAGAAAATGGCAAGCCGCTAAA
TGTAGCTGGTGAAGTTACGTTACTAGTCAATCCTACAGATGCTTGGGACGTTAAAAAACAGTACACAAGCTTAAATGCAA
ACGGAGTGTATGTGACTGCCTTGCCTTACAATTTAAATATCATTGAATCATTATTCGTTCCAGAAAAGAAAGCTATTTCT
TATGTAGCAAAACGTTATGATGCACTTATTGGTGGAGCCTTGAATATTTCTACTTTTGACCAAACGCTTGCATTTGAAGA
TCTTAACTTATATGCTGCAAAACAATTTGCGTATGGTAAAGCTAAAGACGAAAAAGCTGCCGCTGTATGGACATTAAATA
TCAAACCAACAGATCAAACTCCGGAAGGGTGA

Protein sequence :
MTIKLKNNLVNYEEKRTAFVNAVKNEETQEIQNKAYVEMVDAMAADIMDQAKKEARQEADQYISASRTDKNITNEEIKFF
NDINKEVGYKEETLLPQTVVDEIFEDLTTEHPFLASIGMRTTGLRTKFLKSETSGLAVWGKIFGEIKGQLDATFSEEESI
QNKLTAFVVVPKDLENFGPVWVKRFVVTQIEEAFAVALESAFIIGDGKDKPVGLTRKVGKGTNVVDGVYPEKVASGTLTF
ASSKVTVNELTDVYKYHSVKENGKPLNVAGEVTLLVNPTDAWDVKKQYTSLNANGVYVTALPYNLNIIESLFVPEKKAIS
YVAKRYDALIGGALNISTFDQTLAFEDLNLYAAKQFAYGKAKDEKAAAVWTLNIKPTDQTPEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 8e-108 57
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 2e-108 57
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-108 57
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-108 57
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 2e-108 57
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 2e-108 57
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 2e-94 53