Gene Information

Name : LMOSLCC5850_1268 (LMOSLCC5850_1268)
Accession : YP_006696095.1
Strain : Listeria monocytogenes SLCC5850
Genome accession: NC_018592
Putative virulence/resistance : Unknown
Product : phage terminase, large subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1245345 - 1246988 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
ATGATATCAAATAAACACGTTGATAACTATATACAGTCGTATGAAAGTGGAAAAATACTACTCAATAAAGAACGAATCGA
TCTAATAAATTACTTGCAAGGACATGTTCTTAGTAGAGATGATATATATTTTGATGAGACACAGATAGAAAATTATATTG
CTTTTAGTGAAAAATGGTACTTCCCTTTGGACAACTGGGAAAAATTTATTGCACCATTTATTTTTTTATATTTTAAAGAA
GACGATGAACTTTTTTATGAAGAGTTCTTTATAACACTTGGTCGCGGTGGCGGTAAGAACGGATTTATAAGTACATTATC
AAATTATTTTATAAGCCCGCTACATGGGATTAACAATTACGATGTTTCGGTAGTGGCGAATTCCGAAGATCAAGCGAAAG
TTAGTTTTAAAGAAGTATTTAATACAATAGACGGAAATCCTAAATTGGAAGGTAGCTTTGACGCATGGAAAGCACAGATT
ATTGGAAAAGGAACCAACAGTGTTTTTAAATTTCAAACGTCAAATGCAAAAACTAAAGATGGTGGTCGTGAAGGCTGTGT
TATTTATGATGAAACACATGAATATGAAGATAGACAAATAATTGATGTATTCTCTGGAGGACTTGGTAAAGTCGCAAATC
CCAGAGAATTTTTTATTGGCACTAATGGATTTGTAAGAGCGGGATTTTATGACAAGTTGGAAGAACGTAGTAAAGCAATT
TTAAGTGGTGAAAATCTTAACGACCGCATGTTTCCTTTTATTTGTAAGCTAGATGATCCAGAGGAAGTCAAGAATGAAGA
TATGTGGGGAAAAGCAAATCCTGCTTTTGAAAAGCCTTTAAGTCCTCGTTCTAAACGCTTACTAAATAAAGTTAGAAAAC
AATATGAGGCATTAACGAATAATCCAAGCGGCAGAGAAGCGTTCATGACTAAGCGAATGAACCTTCCAGAAGTAGATTTG
GAAAAGGTAGTAGCCCCTTGGGAGGACATTCTCGCAACTAACCGGGAAATGCCAGAACTTCAAAACCGAGCTTGCATTGG
TGCATTTGACTATGCAAGCGTTAAGGACTTCGCAGCTGTTGGATTGCTGTTTCGTGTAGGTGACGATTACATTTGGAAAA
CCCATTCTTTTGCTAGAAAAGGATATTTGGATGTTGCAAACCTTAAACCACCTATCAAAGAATGGGAAAAACAGGGATTA
CTGACGATTGTTGATGAACCTACAATCGACCCCCGTCATGTTGTCAATTGGTTTGTTGAAATGCGAGAAAGATACGGTAT
TCAAAAAGTAATTGGAGATAATTTCCGAATGGACCTGATGCGACCATTGTTTGAAGCAGAAGGATTTGAACTGGAGATTA
TTAGAAATCCACGTGCAGCTCATAGTTTGCTAGCTCCGCGAATTGAAACACTATTTGCTAATCATCGCATTGTATTTGGA
GATAATCCGTTAATGCGTTGGTATACAAATAATGTTGCAGTGAAAATCAAATCGGATGGAAATAAAGAGTATCTAAAAAA
AGACGAGCACAGACGTAAAACTGATGGATTTCAGGCTTTTGTCCATGCTCTTTGGCGTGCGGATGAAATAGAAGATATGG
ATGTAGAAGAGGTATTGAACATGCTTAACGCGATTGCATTTTAA

Protein sequence :
MISNKHVDNYIQSYESGKILLNKERIDLINYLQGHVLSRDDIYFDETQIENYIAFSEKWYFPLDNWEKFIAPFIFLYFKE
DDELFYEEFFITLGRGGGKNGFISTLSNYFISPLHGINNYDVSVVANSEDQAKVSFKEVFNTIDGNPKLEGSFDAWKAQI
IGKGTNSVFKFQTSNAKTKDGGREGCVIYDETHEYEDRQIIDVFSGGLGKVANPREFFIGTNGFVRAGFYDKLEERSKAI
LSGENLNDRMFPFICKLDDPEEVKNEDMWGKANPAFEKPLSPRSKRLLNKVRKQYEALTNNPSGREAFMTKRMNLPEVDL
EKVVAPWEDILATNREMPELQNRACIGAFDYASVKDFAAVGLLFRVGDDYIWKTHSFARKGYLDVANLKPPIKEWEKQGL
LTIVDEPTIDPRHVVNWFVEMRERYGIQKVIGDNFRMDLMRPLFEAEGFELEIIRNPRAAHSLLAPRIETLFANHRIVFG
DNPLMRWYTNNVAVKIKSDGNKEYLKKDEHRRKTDGFQAFVHALWRADEIEDMDVEEVLNMLNAIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1775 YP_253690.1 hypothetical protein Not tested ¥ÕSh1 Protein 7e-170 59
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 2e-159 57
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 2e-159 57
SAOV_1101 YP_005736596.1 Phage terminase large subunit Not tested ¥ÕSa2 Protein 8e-160 57
SAKOR_01945 YP_008492133.1 Terminase large subunit Not tested ¥ÕSa3 Protein 2e-159 57
SAV1966 NP_372490.1 phage terminase large subunit Not tested ¥ÕSa3 Protein 2e-159 57
SA1777 NP_375075.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-159 57