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Name : clpE (LMOSLCC5850_1003) Accession : YP_006695830.1 Strain : Listeria monocytogenes SLCC5850 Genome accession: NC_018592 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1008198 - 1010372 bp Length : 2175 bp Strand : - Note : - DNA sequence : ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTGGAAATGCC GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCAAACTTTGGGTCGAATGAGTTCCCAGGAGCAAGTGGCTCCC CGTTTGACGATATTTTTCGTCAATTGAGTGGTGCTGCAAACCAAGCAAACCGTGAACAAAGAAGCCAAGCTAATGCACAA GTACAAACACAAACTGCTGGCGGTGGTAATGGCATATTAGATGAATTTGGGACTAACTTAACAGATATGGCGAAAAACGA GCAACTCGACCCTGTCATTGGCCGTGATAAAGAAATTAAGCGTGTCATTGAAATATTGAACCGCCGTAATAAAAATAATC CAGTCCTAATCGGTGAACCAGGTGTTGGTAAAACTGCCGTCGTAGAAGGACTTGCAAATGCAATTGTCGCAGGAGACGTT CCAAGCAAACTAATGAACAAAGAAGTTATCTTACTTGATGTCGCTTCGCTTGTTTCCGGAACAGGTATCCGCGGTCAATT TGAAGAACGCATGAAACAACTAATTAAAGAACTTCAAGAACGTAAAAACACGATTCTCTTCATTGATGAAGTGCATACTA TCGTTGGGGCAGGTTCCGCAGAAGGGTCAATGGATGCAGGAAACATTCTAAAACCAGCTTTAGCTCGCGGCGATTTGCAA ATGATTGGTGCTACTACGCTAAAAGAATACCGCACAATCGAAAAAGATGCCGCACTTGAACGACGCTTCCAACCAGTAAC TGTAAGCGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATATGAAGATTTCCATGAAGTAG TTTATTCACCTGAAGCATTAACAGCAGCAGTTGAATTAAGCGCTCGTTATATCCAAGATCGTCATTTGCCAGACAAAGCA ATTGATTTAATGGATGAAGTTGGCTCAAAATATAATCTATCCATTGAAAAACTAGACGAAAATACGGTAAGCGAACGTGT TGCCCGTTTAGAAGATGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCCAAAGTTCGTGACGAAATTA CTCGCTTAGAAGAAAATAAAACAAGCAATTCCTTCTCAGAACGCCCTGTTATTCAAGCATCAGACATACAAGCGATTATT GAAGAAAAAACAGGCATTCCTGTAGGACGCTTACAAGAAGACGAGCAATCCAAAATGAAAAACTTAGAACGTAACTTAAC TGGAAAAGTAATTGGTCAAGAAGATGCCGTGAAAAAAGTAGCTAAAGCAATTCGTCGTAGCCGTGTTGGCCTCAAATCAA AAAATCGCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGTCGTACGCTAGCTCGT GAATTGTTCGGTACTACTGAAGCAATGATTCGTTTAGATATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAACTAAT CGGTTCTCCTCCAGGCTATGTTGGTCACGAAGAAGCTGGGCAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCA TTTTGTTAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTTCTACAAATTTTAGAAGATGGTCGACTAACT GATTCACAAGGGCGTACAGTAAGCTTTAAAGATACAGTCATCATTATGACAAGTAATGCTGGTGCGACAGATACAGAGGC TTCTGTCGGCTTTAATACAACAACAGAAACTAAACTTGAAAAAGGCTCTGACATCCTTGCGAAATTAGGCGCATACTTCA AACCAGAATTCTTAAACCGTCTTGATAGCGTCATTGAATTTAAATCACTAGAAAAAGACGATTTAGTACAAATTATTGAT TTAATGCTCATTGACTTAAATGAAATGCTCGCTCAAGAAGGCGTGACAATCGATGTTTCCAAGGAAGTAAAAGAACATTT GATTGATCTTGGTTATGATCCTAAATTTGGAGCACGGCCACTACGCCGGACTATCCAAGAGCACCTGGAAGATACTATTG CTGACAGTTTAATTGATCAACCAGAAGCGAAAAATCTCGTTGCAACTCTAAACGATAACAAAGAAATCACCATAACAGAA CAAGTAACAGCGTAA Protein sequence : MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGSNEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQ VQTQTAGGGNGILDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ MIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKA IDLMDEVGSKYNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAII EEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAR ELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT DSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID LMLIDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITE QVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-155 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_006695830.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 99 |
| clpE | YP_006695830.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 7e-161 | 52 |
