|
Name : inlC2 (LMOSLCC2376_0233) Accession : YP_006689431.1 Strain : Listeria monocytogenes SLCC2376 Genome accession: NC_018590 Putative virulence/resistance : Virulence Product : internalin C2 Function : - COG functional category : - COG ID : - EC number : - Position : 269878 - 271524 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGAAAAAACGATGGAATTCTGTATTTAAACTAGTTTTAATGGTAGCTGCTATTCTCGGTATTAGTCTATATGTAACGAC AAGTCAAGGGGCGGAGGTTCGCGCGGAAAGCATTGCGCAGCCAACCCCAATTAATGTGATTTTCCCTGATCCGGCTCTTG CGAATGCAGTTAAAACAGCGACTGGAAAATCTAATGTAACAGATACTGTTACGCAAGCAGATTTAGATGGAATAGTTACT TTATCAGCATTTAATACTGGAGTAACAACGATAGAAGGAATACAGTACTTAAATAATTTGATAAGTTTAGAACTTAAAGA TAACCAAATAACTAATTTAACTCCTCTTAAAAATTTAACGAAAATAACAGAACTTGAATTGTCTGGAAACCCGTTAAAAA ATGTGAGCGCGATTGCTGGGTTACAAAGCATTAAAACGCTAGATTTAACTTCTACGCAAATTACAGATGTGACTCCACTT GCAGGTCTTTCCAATTTGCAGGTATTATATTTGGATCTCAATCAAATAACCGATATAAGCCCGCTTGCAGGACTAACTAA TTTACAATACTTATCAATCGGAAATACCCAAGTAAGTGATTTAACCCCACTTGCTAATTTATCTAAACTAACGAATTTAA GAGCTGATGATAATAAAATAAGTGATATTTCGCCACTTGCTGGTTTACCTAACCTTATAGAAGTTCATTTGAAAGATAAT CAAATTAGTGATGTCAGCCCACTTGCTAATTTATCGAACTTATTTATCGTCACTTTAACGAATCAAACAATTACCAACCA ACCAGTGTATTATCAAAATAATCTTGTCGTTCCTAATGTGGTAAAAGGTCCTTCTGGCGCGCCTATTGCACCTGCTACTA TTAGCGACAATGGAACATATGCTAGTCCAAATTTAACTTGGAATTTAACTAGTTTTATTAATAATGTTAGCTACACGTTT AACCAATCAGTCACTTTCAAAAATACAACGGTTCCTTTCAGTGGCACAGTTACACAACCATTAACAGAAGCTTATACTGC GGTTTTTGATGTGGATGGAAAACAAACAAGTATGACTGTCGGCGCGAATGAATTAATTAAAGAACCAGCAGCACCGACGA AAGAAGGTTACACTTTCACAGGCTGGTATGATGCTAAAACTGGCGGGAATAAATGGGATTTCAGCACGGATAAAATGCCA GCAGAAAATATCACATTGTATGCTCAGTTCACGATTAATAGTTATACTGCCTCATTTGACAATGATGGGAAAATAACGAC TCAAAAAGTTACTTATCAAAGTCTATTAGAAGAACCAGCAGCGCCAACGAAGGATGGCTATACGTTCAAAGGTTGGTACG ATGCTAAAACGGGTGGAACTAAATGGGATTTTGCGACAGGAAAAATGCCAGCAGGAAATATTACGCTATATGCCCAATTC ACTAAAAATGATAGCCCAAATCCAAATGATCCAACCCCTAATACCCCAACAGGAAATGGTGATGGTACAAGCAATCCAAG CAATTCAGGAGGCAATACTACACTTCCGACAGCTGGGGATGAAAATACCATGCTTCCCATTTTTGTAGGAGTTTTCTTGT TAGGGACAGCAACGCTAATTCTCCGCAAATCAATCAAAGTAAAATAA Protein sequence : MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTATGKSNVTDTVTQADLDGIVT LSAFNTGVTTIEGIQYLNNLISLELKDNQITNLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL AGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDN QISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTF NQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVGANELIKEPAAPTKEGYTFTGWYDAKTGGNKWDFSTDKMP AENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQF TKNDSPNPNDPTPNTPTGNGDGTSNPSNSGGNTTLPTAGDENTMLPIFVGVFLLGTATLILRKSIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 0.0 | 95 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 0.0 | 94 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 0.0 | 94 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 3e-132 | 71 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 2e-132 | 71 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 5e-133 | 71 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 6e-148 | 60 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 1e-100 | 52 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 6e-101 | 52 |
