Gene Information

Name : LMOSLCC2376_2321 (LMOSLCC2376_2321)
Accession : YP_006691519.1
Strain : Listeria monocytogenes SLCC2376
Genome accession: NC_018590
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2392973 - 2393764 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATCAGCATTAGAACTAAAAAATGTTTCTTTCTCACGTAAAAGAGATTTCGAAATGAAAAACGTGAGCGCGAGTAT
TCCGGAAGGGAAAATCACTACGCTTATCGGTCCAAACGGCTCGGGAAAATCGACTATGCTGCGTTTGATGATGCGCCTTT
TGACCCCGGATAGCGGGGAGATTTTCTTAAATGATAAAAACATTACTGAAATCCCATCTAAAGATTTAGCGAAAAAAATG
ACGATGTTATCACAAGCTCCAGAAGGTTTGGTAGATGTGATGGTGCATGATTTAGTGGCATATGGCCGTTTGCCGCACCG
AAGCTGGCTCTCCACTTTGCAAGAGGAGGACGAGGCGGTCATTCACTGGGCTATTAAAGTGTGTAACTTAGAAGAACTGG
CTTATCGCCCGCTACATTCGTTATCAGGCGGAGAACGACAACGTGCTTGGCTGGCAATGGCTCTTGCGCAAAAAACGCCC
ATTTTATTATTAGATGAGCCAACTACTTATTTAGACATTGCGCATCAACTAGAATTGTTAGACTTACTCGTGCACTTAAA
CAAAGAATATAATTTAACTATCGTGCTCGTTTTACATGATCTGAATCAAGCTGCGATTTATAGTGATTATGTGTTTGTAT
GCGAAAATGGTCAATTAGTCAAAGACGGCTCGCCTAGAGAAGTTTTCACGACAGAGCTGCTTCGAGATGTTTTCCATATT
ACAGCGGATATTACCGAAAAAGATGGAAAGCAGCATATTCATCCACTTGCTTCGACTCGTTTTGAATATTAA

Protein sequence : 
MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEIFLNDKNITEIPSKDLAKKM
TMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDYVFVCENGQLVKDGSPREVFTTELLRDVFHI
TADITEKDGKQHIHPLASTRFEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-39 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-43 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-43 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-43 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-43 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-38 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-40 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2376_2321 YP_006691519.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 1e-39 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2376_2321 YP_006691519.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 1e-39 49
LMOSLCC2376_2321 YP_006691519.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 3e-34 43