Gene Information

Name : xerD (LMOSLCC2376_1917)
Accession : YP_006691115.1
Strain : Listeria monocytogenes SLCC2376
Genome accession: NC_018590
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1971427 - 1972320 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
ATGAATGATTTAATAGAAGATTTTTTACATTTTTTAATTGTAGAGAGAGGTTTATCCGCGAATACAATCAAAGCTTATGA
ACGAGATTTACGCTATTTTGTTTCTTATATGGATGTAGCGAAGGGATTAACAGATCCGAATACACTTGAACGAAGCGATA
TAGTTGGTTTTATGGCATTTGCAAGACAAGAAGGGAAATCACCAAGAAGTGTGGCGCGCTATATTGCTTCACTACGATCT
TTCTTTCATTATTTAATGCACGATGGGAAAATGTCACATGACCCAATGATTCAAATTGAAACGCCGAAGCAAGCGCAAGG
ATTACCAAAAGTTTTAAACCTAGATGATGTGGAGAAATTACTTAGTTCCTCTGATACGAGTACACCACTTGGGTTAAGGG
ACCAAGCAATGATGGAAATTTTATATGCGACAGGGCTTCGTGTAACGGAACTTGTCAGCCTGAAAATGGACGATTTACAT
CTTCATATGGGTTTTATTCAAACGATTGGTAAAGGAGATAAAGAAAGAATTATCCCGCTTGGAAAAACGGCAACAACTGT
GTTAGAGAAGTATTTAGAGGAAGCGAGACCGAAACTTCGTAGACCAAAATACCGAAATGATTTTGTGTTTTTAAATCATC
ACGGTCAAGGACTCACGAGACAAGGTTTCTGGAAAATTTTAAAAGGTATTGCGAAAGAATCTGGCATTGAAAAGCCGATT
ACACCGCACACTTTGCGTCATTCATTTGCCACTCATTTACTTGAAAATGGGGCTGATTTAAGGTCGGTTCAAGAACTCCT
TGGTCACGCCGATATCTCCACTACACAAATTTATACACACGTAACAAAGCTGCGGTTGAAAGATGTCTACAAACAATTCC
ACCCGCGCGCTTAA

Protein sequence :
MNDLIEDFLHFLIVERGLSANTIKAYERDLRYFVSYMDVAKGLTDPNTLERSDIVGFMAFARQEGKSPRSVARYIASLRS
FFHYLMHDGKMSHDPMIQIETPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH
LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKILKGIAKESGIEKPI
TPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRLKDVYKQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-57 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-57 43