Gene Information

Name : metC-1 (LMOSLCC2376_1638)
Accession : YP_006690836.1
Strain : Listeria monocytogenes SLCC2376
Genome accession: NC_018590
Putative virulence/resistance : Resistance
Product : cystathionine beta/gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1676579 - 1677751 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAATGAATATGCGCAAAATACGGCTGTGATTAAAGCGAGCCTCGGGATTGATAAAGAGACAGGTGCGCTTAATAC
GCCAATTCATTTATCGTCTACTTTCCATCAACATGACTTTGATAATTATCACGCTTATGATTATGCGAGAAGTGGGAACC
CAACGAGAGAAAAAGTGGAACAAGCGATTGCGGAACTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGGATGGCG
GCTGTTTCTGCGGCGCTCTTTACTCTTTCTAAAGGGGATCATTTTATCATTGCAAAAGATGTGTACGGCGGGACATTTCG
TTTGGTGGAGCAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACGACAAATATTGACGAAGTTGCGAAGG
CATTTCAAGCGAATACGAAATTGGTTTACTTGGAAACACCTTCTAATCCGTTGTTGCATGTGACAGATATTCGGACGGTT
GCCAAACTTGCGAAAGCGAATGGGTGTTATACATTTGTGGATAATACATTTTTGACGCCACTAATTCAAAAACCGTTAGA
TTTGGGTGCGGACTTGGTTATCCACAGTGCGACGAAGTTTCTTGGCGGGCATAGCGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAGTTTGGCCGAAGCCGTTTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGTGTGCAGGATTCGTGG
TTGTTGTTGCGAGGACTTAAAACACTTTCTGTCCGGATGAAAGCTGGGACGGAGACGGCGGAGAAAATTGCGCTATTTTT
AAATGCTGAACCAGATGTGGTGGCAGTGCATTATCCGGGGTTACCTTCTCATGCGGGTTATGACATTCAAGTGGAACAGG
CGATAAGTGGCGGGGCTGTCTTATCGTTTGATCTTGGTAGTGAAGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTTTAGGTGCGGTCGAAAGCATTCTTTCTTACCCAGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAGCGTTTGGCGCAAGGAATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCCGATGATTTGATTG
CTGATTTAAAACAAGCACTTTCTTTCATTAAGAAGGGAAGTGTTGCGAAATGA

Protein sequence :
MANEYAQNTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLDLGADLVIHSATKFLGGHSDILAGLIVTNNPSLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQAISGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-76 49
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-74 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-75 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC-1 YP_006690836.1 cystathionine beta/gamma-lyase BAC0207 Protein 3e-54 43