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Name : gabD (LMOSLCC2479_0925) Accession : YP_006687188.1 Strain : Listeria monocytogenes SLCC2479 Genome accession: NC_018589 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 947410 - 948876 bp Length : 1467 bp Strand : + Note : - DNA sequence : TTGAGTATTAAAGAAACAGCATTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAATCCAGCAAACGGAGATGTTATTGCAAAAATCGCTCAAGCTGGACCAAGTGAAACAAAAA AAGCTATTAAAGCGGCAAAAGATGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGACCGTGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACGTTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCTTAACTGGCGTAGAAAACTTCCGATTCGCTGCGGAAGAAGCAAGAAGATTATATGGTGAAACAATCC CTGCTCCAAACAATCATGCGTTTATCGTGAAAAAACAACCAATTGGCGTAGTTGCTGCTATTACTCCTTGGAATTTCCCA GGTGGTATGGTGACGCGGAAACTTGCACCGGCGCTGGCAACTGGGAATACAATTGTATTAAAACCTTCTGGAGATACGCC GCTTTCGGCTCTAGCTATTTTTGAAATTTTTGAAGAAGCTGGCTTGCCAAAAGGCGTTGCAAATATCGTTATGGGTAGCT CCAAAGAAATCGGTGAAACGTTAACTGATAGTGATGATGTTCGTAAACTAACTTTCACTGGTTCCACGAAAGTTGGTCAA ACACTCTTTAAACAATCAGCCGATACACTGAAAAAAATCTCACTCGAACTTGGTGGTCATGCGCCATTTATCGTATTTGA TGATGCGAATCTTGATGCCGCTGTAAATGATTTAGTTGCTGCAAAATTCCGCAACAACGGTCAAGTATGCGTGTCACCAA ACCGAATTTTCGTTGCCAAAGAAATCAAAGAAAAATTCACTAAAGCGTTAGTTGCTAAAGTAGAACAATTAAAAGTTGGT AACGGTTTAGATGACGTGAATGTTGGTCCGCTTATCCGCGAAGATGCGATAGATAAAATTGATAAACAACTTAAAAACGC CACAGAAAAAGGTGCTAAAGTCTTAACTGGTGGCGGTCGTCTAACAGGCTCTGACTATGATAAAGGAAACTTTTATAAAC CCACTGTCTTAGATAATGTTACCCGTAAAATGGACATTTTTTATGAAGAAACATTTGGTCCAGTAATCCCGCTCATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTACACTAAAGACTT AGCACGCGTAGAAAAAGTGGGAGCAGCACTAGAATACGGAATGGTCGGAGCAAATGAAATTGCCATCTCTAACCCAGAAA CTCCATTTGGTGGAGTAAAACATTCTGGTTTCGGTCGCGAAAACGGTCATTATGGAATGGAAGAATACATCCAAGTGAAA TTCATCAACTTAAAATATCGTGATTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGDVIAKIAQAGPSETKKAIKAAKDAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGVENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSADTLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVEQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATEKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTRKMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-106 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-79 | 41 |
