|
Name : LMOSLCC2479_0648 (LMOSLCC2479_0648) Accession : YP_006686911.1 Strain : Listeria monocytogenes SLCC2479 Genome accession: NC_018589 Putative virulence/resistance : Resistance Product : heavy metal-transporting ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.- Position : 680281 - 682161 bp Length : 1881 bp Strand : + Note : - DNA sequence : ATGAAAGATTGGATGAAGCAGAATTGGCAATTTATTACGACAGGTATTAGCGGAATTTTGATTGTGATTGGCTGTTTGGT CGGTAGTGATGTTGGTGACTTTTGGACAGCGATTATTTTCCTAAGTGCTTTTGTTATTGGTGGTTTTGAGCAAGCTAAAG AAGGTATTCAAGCAACTATTAAAACAAAGAAGTTAAACGTGGAGCTTTTGATGATTTTAGCGGCTACCGGTGCATCGATT ATTGGTTATTGGTTTGAAGGGGCCATACTTATTTTTATTTTCTCGGTTAGTGGGGCATTAGAAACGTATACGACGAATAA AAGTAAGCGCGAAATCACGAAATTAATGGCATTTCAACCAGAACGAGCTTTTCGTTTACTTTCTAATGGGGATTTAGAGG AAGTTGCTGCAAAAGAGCTACAACTGGATGATATGGTCTTCGTTCGGCCGGGAGAAAGTGTTCCAATCGATGGAGTGATT GTTCGCGGCTCAACCACATTAAATGAAGCAGCCATTAATGGGGAATCTGTTCCAGCAACGAAAACTGTTGGTGCGGATGT GTTTGGTGGAACGGTCAATGTAAGTAGCGCTATTACGGTTAAAGTAACACAAACATTTGAAAATACGATTTTCAGTAAAA TTATTCGTTTAGTAGAAACTGCTCAAAGCGAACCGTCTAAAACCGCGCGTTTTATTGAACGATTTGAGGATGTTTATGTA AAAGCAGTTCTATTATTTGTGTTAGTAATGATGTTCTTACCTCATTTTGCACTAGGGTGGTCGTGGAATGAAACCTTTTA TCGCGCGATGGTTTTGTTAACAGTTGCATCACCTTGTGCGCTAGTAGCTTCTGTAACGCCTGCGACTTTAGCGGCAATTT CTAACGGTGCGCGTCACGGTATTTTATTTAAAGGCGGCGTACACTTGGAAAACTTGCGCGGTGTAAAAGCCATTGCATTT GATAAAACGGGAACTTTGACAAATGGAACGCCCGCACTAACCGATCGACTATTCGCCGAAAATGTTGATAAACAGTTAGT AATCAATGTGGTTGGAGCGATGGAACGACAATCTTTACATCCGTTAGCTGCGGCAATAACACAAGACTTAGAACCGGAAA TCACCGAAAAGTTAACGGAAATAGAAGTGACGGATGTACCTGGTTGGGGAGTTCAAGCGATTTATCGAGAAGGGAATTGG CAAGTTGGAAAGGCTGGGTTTGTTGGGAAAGAAGCAGCGGCAGCATTTTCAAATGGCGCATTTGAACGACTTGCAAGTGA AGGGAAAACGATTGTTTATGTAGCTAAAGACGGCGTAATTCAAGCCATGTTTGCTCTTAAAGATACATGTCGTCCTGAAG CTATTCGTACGATCAAAGCCCTTCAAGCAAAAGGGATTAAGACTATTATGGTGACGGGCGATAATGAGCAGACAGGTGCG GCAATTCAAGCCGAACTAGGGATGGACTATGTCGTTTCCGGTTGTTTACCTGAGAAAAAAGTGGATGTGTTAAGAGAATT GTCGGTTACTTATGGCAGTGTGGCAATGGTTGGCGATGGAATTAATGATGCCCCGGCACTTGCACATGCGGCTGTTGGAA TTGCAATGGGCGAAGGTACAGATATCGCAATGGAAACAGCCGATGTTGTCCTAATGAAAAATGATTTAGAAAAAATTCCC TACGCTTACACGCTTTCGGAACGACTTCACTGGATCACCTGGCAAAATATTTGTTTTGCGATTGCTGTAATTCTTGTTTT AATAACGGCTAATGTCTTCCAACTAATCAATTTACCATTCGGGGTTGTGGGACATGAGGGAAGTACTATTTTAGTTATTT TAAATGGTCTTAGATTGCTTAGATCTAACCGGAAAAAGTGA Protein sequence : MKDWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAIIFLSAFVIGGFEQAKEGIQATIKTKKLNVELLMILAATGASI IGYWFEGAILIFIFSVSGALETYTTNKSKREITKLMAFQPERAFRLLSNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFENTIFSKIIRLVETAQSEPSKTARFIERFEDVYV KAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVASPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAIAF DKTGTLTNGTPALTDRLFAENVDKQLVINVVGAMERQSLHPLAAAITQDLEPEITEKLTEIEVTDVPGWGVQAIYREGNW QVGKAGFVGKEAAAAFSNGAFERLASEGKTIVYVAKDGVIQAMFALKDTCRPEAIRTIKALQAKGIKTIMVTGDNEQTGA AIQAELGMDYVVSGCLPEKKVDVLRELSVTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIP YAYTLSERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 3e-102 | 43 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 2e-102 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMOSLCC2479_0648 | YP_006686911.1 | heavy metal-transporting ATPase | BAC0092 | Protein | 2e-110 | 45 |
