Gene Information

Name : LMOSLCC2479_0417 (LMOSLCC2479_0417)
Accession : YP_006686680.1
Strain : Listeria monocytogenes SLCC2479
Genome accession: NC_018589
Putative virulence/resistance : Virulence
Product : HTH domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 437742 - 437945 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
TTGAAAGTCCGTAATAAAGTGAAACAGTTGCGTGAAGAAAGAGGAATCGGGCAAAATGAATTAGCTTTAGCATTAGAAGT
TTCAAGACAAACAATCCATGCTATCGAAAAAGGTAAATATAATCCTAGTTTAGAGCTAAGTTTGAAGATGGCACGCTATT
TTCGTTTAACAATAGAAGAGATTTTTCAACTGGAGGAGAATTAG

Protein sequence :
MKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSLELSLKMARYFRLTIEEIFQLEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-11 54
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-11 54
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 6e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2479_0417 YP_006686680.1 HTH domain-containing protein VFG2168 Protein 9e-12 54
LMOSLCC2479_0417 YP_006686680.1 HTH domain-containing protein VFG2175 Protein 9e-12 54