Gene Information

Name : LMOSLCC2479_2247 (LMOSLCC2479_2247)
Accession : YP_006688510.1
Strain : Listeria monocytogenes SLCC2479
Genome accession: NC_018589
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 2289590 - 2290369 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTAAGGGACGTTAATTTTAGTTATAATGGAACCGATGCAATTTTGAAAAATGTCTCATTTACTATCCAGAAAAA
TAAAATCAATACGATTGTTGGGCCAAATGGTAGTGGAAAATCTACCTTATTAGAAATTTTGGCTAGACTCCTTTCACCTA
ATTCTGGGGATGTTTTACTGGAAGGAAAATCGATTTTTGAATGGAAAGCAAAAGAATTTGCGCAAAATGTGGCGATTGTT
CATCAAAGTAATGTTCTTCCGAATGAACTAATGGTGAAGGAATTGCTTTACTTTGGTCGTCTACCTTATAAAAATTGGCG
AATGACTCGGACGAAGGAGGATGATCTAGCTGTTGAGCGGGCTTTGATGCAAACGGAGCTAACTGAAAAAGCAGAGAAAT
TTGTTGATAGTCTTTCTGGAGGAGAGCGGCAACGTGTTTTTATAGCAACAGCATTAGTTCAGGATACACCTATTTTGCTG
TTGGACGAGCCCACGACATTTCTAGACATGTATTTTCAACTAGAAATTTTAGAATTAGTGAAACGATTAAATCAAGAAGA
AAATTTGACTATTGTAATGATTTTGCATGACTTAAACCAAGCACTGATGTATAGTGACCATTTGATTGTGATGAAAAATG
GGGAAGTGGTTGCAAAAGGAGAACCAGAAGAATTACTAACAACAGATTTGATTGCTGAAACTTATGGTGTAGTTGCAGAT
GTTTTAAACGATGCGAACAACGGGAAATACATTGTTCCTCAAAGACGAAAGGAGTTTTAG

Protein sequence : 
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIV
HQSNVLPNELMVKELLYFGRLPYKNWRMTRTKEDDLAVERALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL
LDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVAD
VLNDANNGKYIVPQRRKEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-45 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-45 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-45 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2479_2247 YP_006688510.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 7e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2479_2247 YP_006688510.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 7e-43 41
LMOSLCC2479_2247 YP_006688510.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 2e-43 41