Gene Information

Name : lysS (LMOSLCC2372_0230)
Accession : YP_006683557.1
Strain : Listeria monocytogenes SLCC2372
Genome accession: NC_018588
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 235477 - 236973 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAACGAGAATCATGAAGAACTAAATGACCAACTCATCGTCCGTCGTGAAAAAGTGGACACATTGCGCGAAGAAGG
CATAGATCCTTTTGGCGAAAAATTCATCCGTTCCATCAGCCCGGAAGAAATCGAAACAAAATTCGCTGATAAATCAAAAG
AAGAACTTGAAGAAGCTGCTATTGAAGTTTCTGTAGCAGGTCGTATTATGACAAAGCGTGTAAAGGGTAAGGTAGGTTTC
ACACATATTCAAGACCGTTTCCATCAATTACAAATCTATATCCGTAAAGATGCGATTGGCGAAGATGCTTACGCAGTCTT
CAAATTAGCAGATCTAGGTGACATTATTGGTATAAAAGGAACTATTTTCCGTACTAATACAGGTGAACTTTCTGTTAAAG
CAACGGAATTCACTTTGCTTTCCAAATCGTTACGTCCACTTCCTGATAAATATCATGGTTTAAAAGACGTAGAACAACGC
TATCGTCAACGCTATTTAGACTTAATCACAAACGAAGAAAGTCAAAATCGCTTTGTGATGCGCAGTAAAATCTTGAAATA
CACTCGTGATTATATGGATAACCAAGGATTCTTAGAAGTAGAAACTCCGGTGCTTCATACAATTGCTGGTGGTGCTGCTG
CAAAACCATTTATCACGCACCATAATGCGCTTGATATGGAATTATACTTGCGAATCGCTTTAGAACTACACTTAAAACGT
CTAATCGTTGGTGGGATGGATAAAGTGTACGAAATTGGCCGTGTTTTCCGTAATGAAGGAACATCCACGCGTCATAACCC
AGAATTTACAATGCTAGAATCCTATGCAGCATACGAAGATTATGAAGATGTTATGGATCTGGTAGAAGGTTTAGTATCCA
CGGTATGTAAACAAGTAAATGGAACAACAGAAATAACATACGGTGAATACAAAGTAGATTTAACTCCTAACTGGCGCCGT
ATCCACATGGCAGATGCTGTAAAAGAATACGTAGGAGTGGATTTTTGGAACGTAACTTCCGATGAAGAAGCGCGTGAACT
AGCAAAAAAACATGATGTGCCAGTAACGGAACACATGACATACGGGCACATTCTTAATGAGTTTTTCGAAACATACGTAG
AAGAAAAGCTCATTCAACCAACCTTTGTTTACGGGCATCCGGTGGAAATTTCCCCATTAGCGAAGAAAAACAAAGAAGAT
GAACGTTTTACTGACCGTTTTGAATTATTTATCGTTGGTCGTGAACATGCAAATGCATTCTCAGAATTAAACGATCCAAT
TGATCAAAGAGAACGCTTTGAAGCGCAAATGAAAGAACGTGAGCAAGGTAATGATGAAGCACACGGAATGGATGCAGATT
TCCTTGAAGCTTTAGAATACGGTCTACCGCCAACTGGTGGACTTGGAATAGGTATTGATCGTCTAGTAATGCTATTAACA
GATGCCCCGTCTATTCGTGATATCCTATTATTCCCAACTATGAAACACCGCGACTAA

Protein sequence :
MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGF
THIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR
YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR
LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRR
IHMADAVKEYVGVDFWNVTSDEEARELAKKHDVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKED
ERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT
DAPSIRDILLFPTMKHRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006683557.1 lysyl-tRNA synthetase VFG1668 Protein 1e-105 48