Gene Information

Name : xerD (LMOSLCC2372_2021)
Accession : YP_006685348.1
Strain : Listeria monocytogenes SLCC2372
Genome accession: NC_018588
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2049974 - 2050867 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
ATGAATGATTTAATTGAAGATTTTTTACATTTTTTAATTGTAGAGAGAGGTTTATCCGCGAATACAATCAAAGCTTATGA
ACGAGATTTACACTATTTTGTTTCTTATATGGATGTAACGAAGGAGTTAACTGATCCGAATACACTTGAACGAAGCGATA
TAGTTGGTTTTATGGCATTTGCAAGGCAAGAAGGAAAATCACCAAGAAGTGTAGCGCGATATATTGCTTCACTGCGATCC
TTCTTTCATTATTTAATGCATGATGGGAAAATGTCACATGACCCAATGATTCAAATTGAAACGCCAAAGCAAGCCCAGGG
ATTACCAAAAGTTTTGAACCTTGATGATGTCGAGAAGTTACTTAGCTCTTCTGATACAAGTACACCTCTCGGACTGCGTG
ATCAAGCAATGATGGAAATTTTATACGCGACGGGGCTTCGTGTAACCGAACTTGTCAGCTTGAAAATGGACGATTTGCAC
CTTCATATGGGTTTTATCCAAACGATTGGTAAGGGGGATAAAGAGAGAATTATCCCACTGGGAAAAACGGCAACAACTGT
GTTAGAAAAGTATTTAGAGGAAGCGAGACCGAAACTTCGTAGACCGAAATACCGAAATGATTTTGTCTTTTTAAATCATC
ACGGTCAAGGACTTACAAGACAGGGTTTCTGGAAGATTTTAAAAGGTATTGCAAAAGAATCGGGCATTGAAAAGCCGATT
ACACCGCATACTTTGCGTCATTCATTTGCCACTCATTTGCTTGAAAATGGGGCTGATTTAAGGTCGGTTCAAGAACTCCT
TGGTCACGCCGATATCTCCACTACACAAATTTATACACACGTAACAAAGCTGCGTTTGAAAGATGTCTACAAACAATTTC
ACCCACGCGCTTAA

Protein sequence :
MNDLIEDFLHFLIVERGLSANTIKAYERDLHYFVSYMDVTKELTDPNTLERSDIVGFMAFARQEGKSPRSVARYIASLRS
FFHYLMHDGKMSHDPMIQIETPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH
LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKILKGIAKESGIEKPI
TPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKLRLKDVYKQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-57 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-57 43