|
Name : polA (LMOSLCC2372_1628) Accession : YP_006684955.1 Strain : Listeria monocytogenes SLCC2372 Genome accession: NC_018588 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 1622203 - 1624860 bp Length : 2658 bp Strand : - Note : - DNA sequence : GTGAATGACAATATCGAGGAGGATATCCCTGTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCTTT TTATGCGTTACCACTTTTAAATAACGATAAAGGTGTTTACACAAATGCGGTGTATGGATTCGCAATGATGTTGATGAATG TACTCGAAAAAGAAAAACCCAGCCATGTGCTCGTTGCATTTGATGCTGGAAAAACAACTTTTAGACATACAACATTTAAA GGTTATAAAGGCGGACGTCAAAAAACCCCAAGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAGCTTTTAACGGCGTA TGATATCCCGCAATATGAACTGGCCAATTACGAGGCAGACGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGATG GAATGGAAGTTGCAATTATTACCGGAGACCGCGATTTAACACAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAA AAAGGCATAGCCGATATGGAAACCAACACACCAGAAACACTAAAAGAAAAATACAATCTAACTCCTGAACAAATCATTGA TATGAAAGGTTTAATGGGAGATTCCTCCGATAATATTCCTGGGATTCCAGGCGTTGGTGAAAAAACAGCCTTAAAACTCT TACATGAATTTGGCGGAACGGTGGAAAGTGTGTTAGAGCACGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTA CTAGAAAATAAAGAATTAGCTATTTTAAGTAAAGAGCTAGCTACAATCAATGTGGATTCACCGATTGAATGCACAGTCGA AAGCACGAAATATGACGGGTATCAAACTGAAAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAA ATATCGAAGGAGATACACCGGAGGAATCGAAAGAACTAAAAGAATTGTCTTTTGAAATAGTAACGGAATTAAAAGAACAA CATTTTGGTGGGAAAACCGCACTTTATGTGGAGCTAGAAAATGATAATTACCATACAGCAAACTTCATCGGGCTGACAGT ACATTCCAGCCAAGGAACGTATTTCTTTACAAAAGAAACAGCTGAAAGTAGTGAGGCATTCCGCAAATGGGTAGAAAGTG ATCAAACAAAAGTAGTGTATGATGCGAAGAAAACAATAGTTGCAATGAACCGCATTGGTTTGGCAATTTCTGGTATCACA TTTGATATCATGTTAGCATCTTACTTGTTAAATCCATCTGATTCAATTGATGATTTTACAAGTGTTGCAGTAAGACATGA TTACACAGAAGTAGAAACAGATGAAGCAGTCTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGG CACACTTAGCTAGGAAAGCAGTGGCCATTGCTGACTTAGAGAAAAGACTAGTTGATGATTTAGAGAAAAATGAACAACTA GCTTTGATGGAAGACCTAGAGCTACCACTAACATTTGTTTTAGCAGAAATGGAGATGCAAGGAGTCAGCGTAGATACAGA TCGGCTTGAAGATATGAAAGTAGAGCTGGGTGGAAGACTAAAAACATTAGAAGCATCCATTCATTCACTAGCTGGCGAAG AATTCAATATTAATTCACCGAAACAACTAGGTGTAATTTTATTTGAAAAGCTGGAACTTCCCCCAGTCAAGAAAACAAAA ACAGGCTATTCAACAGCTGCGGATGTACTGGAAAGTTTGTCTGGAAAACACGCGATTATTGATGAAATTTTGTTATATCG TCAACTTGGTAAAATTCAGTCCACTTATATCGAAGGGCTGCTTAAAGTGACGGATAAAGAAACACATAAGGTCCATACAC GTTTCAACCAAACATTAACGCAAACGGGACGTTTAAGTTCAGTCGATCCGAACTTACAAAATATCCCGATTCGTTTAGAA GAAGGTCGGAAAATCAGACAAGTTTTTGTGCCGAGTAAACCTGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGA GTTGCGAGTTTTAGCACATATTTCTGAAGATGAGAATTTAATTTATGCATTTAAGCACGATTACGATATCCATACGAAAA CAGCCATGGACGTGTTTCATGTGGAGAAGGAAGAAGTGGATTCACTAATGCGCCGTCAAGCTAAAGCAGTAAACTTTGGT ATTGTATATGGTATTAGTGATTATGGGCTTTCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCG TTACTTTGTGAGTTATCCAGCCGTGAAAGAATATATGCAAGACATTGTCCGTTTTGCGAAAGAAAAAGGCTATGTAGAGA CCATTTTACATCGTCGTCGTTATATTCCGGAGATTGTTAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACTGCG ATGAACACACCTATTCAAGGTAGTGCCGCTGATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGA AAAATTAGAAGCAAAATTATTACTTCAAGTGCACGATGAATTAATCTTCGAAGCACCTGAAGCTGAAATAGCTAAATTAG AAGAAATTGTCCCAGATGTTATGGAAAATGCAGTAGAGCTTTCTGTGCCGCTTAAAGTAGATAGCGCCTTTGGTGACACT TGGTACGACGCGAAATAA Protein sequence : MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFK GYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITK KGIADMETNTPETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELSFEIVTELKEQ HFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGIT FDIMLASYLLNPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQL ALMEDLELPLTFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTK TGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLE EGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFG IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTA MNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDT WYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
