Gene Information

Name : kdpE (LMOSLCC2755_2698)
Accession : YP_006683148.1
Strain : Listeria monocytogenes SLCC2755
Genome accession: NC_018587
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2770072 - 2770767 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGAACAGCAAACGACTTGTGCTAATTGTGGAAGATGAAGAGGGTATCAGTAATTTTATTTCAGCTGTTTTGACTGCGAG
TGATTACTCGGTGATTAAAGCAGTGAATGGAAAAGAAGCGCTAGAGCAGACAGCAAGCCATTCGCCAGATGTTGTGCTAC
TCGACCTAGGTTTGCCCGATGTAGAAGGACTAGACGTGCTTCGTGATATTCGTGTTTGGTCAAAAGTGCCGATTATTGTT
GTATCCGCGCGCGATCACGAACGAGAGAAAGTGACGGCACTTGACCTTGGTGCAGATGATTATATTACGAAACCATTCGG
CACATCGGAACTACTGGCGCGGATTCGAACTGCCCTAAGACACATTCAACCAAGCAGCAAAGAAGCGCCAAATGATCATA
TTATTCGCATTCAAGACCTGTATATTGATGACGACCGCCGACTTGTCAAAATGGGAGATAAGGAAATTCATTTTACGCCA
ATTGAATATAAAATTTTGCTTCTATTAGCTCGCCACGCCGGAAAAGTCCTTACGCATGATTTTATTATTCGCGAAATTTG
GGGACCTTATCCAAGTGAAAACCAAGCACTTCGGGTCAATATGAGTAATATCCGACGTAAAATTGAACAAAATCCGGCAG
AACCTGCATACATTTTGACAGAAGTTGGGGTTGGATACCGGATGGCAGAAGAATAA

Protein sequence :
MNSKRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDVEGLDVLRDIRVWSKVPIIV
VSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTP
IEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEQNPAEPAYILTEVGVGYRMAEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 5e-42 50
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-42 50
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 4e-23 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 6e-23 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 6e-23 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 6e-23 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 6e-23 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 3e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_006683148.1 DNA-binding response regulator NC_012469.1.7685629. Protein 4e-30 43