|
Name : LMOSLCC2540_0366 (LMOSLCC2540_0366) Accession : YP_006677909.1 Strain : Listeria monocytogenes SLCC2540 Genome accession: NC_018586 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 389621 - 391390 bp Length : 1770 bp Strand : + Note : - DNA sequence : ATGAAATCCAAAGGGAGACTGTTTTTGTACGTTGTTTTGGCGTTGTCGATTGTTATTGGGACGAATGTATTTATAAAAAT AGATGCACATGCAGCCGCTGCACCGCCAGCTGCAATCAGCCAGATTTTTCCCGATGATGCTTTAGCGACAGAAATTCAAA CTACACTCGGAAAGTCTAGTACAGCAGAGGTTGTCACACAAACAGATTTAGATACTATTAATTCATTAACCCTTACTTCT AAAGGTATCAGCTCCCTAGAAGGTATGAACTACTTGACCAATTTAGGAACTTTAATTTTAACTGGTAATCAAGTAAGCGA TATTTCGCCACTTAAAGGCTTAACTAACTTGACCATGCTTCAGCTGAGTGGAAATCCGATTAGCGACATTAGCGCACTTA GTAACTTGAAAAACTTACAAGCTCTAGATATTAACGACGCGCAAGTTACTGACATCACGCCACTGAGCGGTTTAACAAAT CTAAAGGGTTTAGGCTTATATAATAATCAATTGGAGAACCTTAGTGGAGTAAATAGTTTACATCAACTCCGCTCCTTAAA TGTTAGTAATAATAAGCTTACGAACCTAGATGAGCTACAAGCGCTAAGCAATTTAAGCGTTCTATATGCAAATGAAAACC AAATTAACAATCTTCAGGGGCTAAGTAATTTAAATAACCTTTTCTTGCTTGATTTATCAGCGAACCAAATTGTGGATACT ACTCCACTCGCTGGCTTAACTAAGGTACAAACATTATACGTATCAAACAATCAAATTAGTGATGTAACTGGTCTTTCGAG TTTAATAAATCTAGATTGGCTCGATATAAGCCAAAATAAAATTAGTAACATTAGACCTTTAAACAGTTTAACGAAGCTAA CAATTATTCAAATGACTAATCAATTAATCGTAAACGAACCGATAAGTTTCGAAAGCACTGTAACGATTCCTAATTTAATA AAAAACATTGCGGAACAAACGATTGATCCCGATACAATTAGCGATAACGGTGTGTATGCGAATGAAGCTGTTACATGGAA TTTACCTAGTTATATTCCTAAAGTCAGCTACACCTTTATTGAACGTGATACGATTGGTAATGCAACTGGAAATTTCAGTG GGACTGTAGAACAACCATTAGTACAATATTTTAAAGCAACTTTCAATATTGACGGGCAAGAAACAACGGAAAATGTCGAA ACAGGGACACTTTTACAAGAACCACCAACCCCAGTCAAAGAGGGTTATACATTTAACGGATGGTATGATGCTGAAACAGG TGGAACAAAATGGGACTTTACAGCCGATACGATGCCAGCAAATGATATAACGTTGTATGCCCAGTTTAGTATTAATAGTT ATACCGCAACTTTTGATGTAGATGGCGTCATTTCTACTCAAGCGGTAGAGTATCAAGGTTTACTGGAAGAGCCACCAGCG CCAACTAAAGATGGTTATACATTTAAAGGTTGGTATGATGCCAAAACTGGTGGAACAAAATGGGACTTTACAAACAATCA AATGCCAGCAAATGATATAACCTTGTATGCCCAGTTTAGTAAAGATGCATCTTCTGGTGGGGACGGTGGAGGAACCGATG AAGGTGGAGGTAACTCTGAAAATAGTACAGAGGGAGCTCCTAATACGAGTGATATAGATACTATAAACCACATCGTACTA CCAGCAACAGGAGATGACCATGTGCTTTTTCCAATCTTTATTGGAACATTTCTTACGAGTTTAGCATTACTTACACTTAG AAGAAAATAA Protein sequence : MKSKGRLFLYVVLALSIVIGTNVFIKIDAHAAAAPPAAISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTS KGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTN LKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDT TPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTVTIPNLI KNIAEQTIDPDTISDNGVYANEAVTWNLPSYIPKVSYTFIERDTIGNATGNFSGTVEQPLVQYFKATFNIDGQETTENVE TGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFSINSYTATFDVDGVISTQAVEYQGLLEEPPA PTKDGYTFKGWYDAKTGGTKWDFTNNQMPANDITLYAQFSKDASSGGDGGGTDEGGGNSENSTEGAPNTSDIDTINHIVL PATGDDHVLFPIFIGTFLTSLALLTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 1e-111 | 47 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-110 | 44 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 3e-109 | 44 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 2e-109 | 43 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 5e-86 | 43 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 2e-86 | 43 |
