|
Name : inlD (LMOSLCC2540_0275) Accession : YP_006677818.1 Strain : Listeria monocytogenes SLCC2540 Genome accession: NC_018586 Putative virulence/resistance : Virulence Product : internalin D Function : - COG functional category : - COG ID : - EC number : - Position : 291984 - 293690 bp Length : 1707 bp Strand : + Note : - DNA sequence : ATGAAAAGAAAAAAAACAGCATTACGTATCTTGGTAACTCTGGCTGTAGTAATGGCAATTAGCTTTTGGGTAGGGACTAG CTCAAAAGAGGAAGTACAGGCGGCAGTAATTGATCAACCGACGCCAATTAATGAAATTTTTACAGATGAGAATTTAGCAA ACGCAATAAAAGCAACTTTAAATAAACCTAGTACTACATCTGACGTTTCACAAGCAGAGCTAGATTCTATAAGTGAAGTA ACGGCAGAAAGTAGCAATATAGCTTCTTTAGAGGGGGCGCAGTATTTAAATAATATAGATACATTAATTTTAAATAATAA TAAAATAACGGATTTAAATTCACTTGCAGGACTATCTAAATTAAGGATATTAGAAGCAAATGACAATCAATTAAGCGATA TAAGTGCACTAGCAAATGTGACAAGTCTGCACCAATTAAGATTAGCTGGAAATCAAATAAAACAGTTAAATGGAGTTAGT AATTTAATCAATCTAGAAACCATAGAACTAAGCAACAATCAAATAACGGATATAAGCCCAGTTTCAGGTTTGAAAAACTT AATTGGTCTTGGAATAGATTATAATGATATCAGTGATTTAAGCCCAATTGCTGGCTTAGCAAAGTTAAGTCATTTAACTG CAGACAATAACCAAATAAGTGATTTGAGTCCTATTTCAAGCTTAGGGGCTATGGAAATTATGCGACTAGATAAAAATCAA ATCAGTGATGTAACCCCAATTGCGAATTTGGCTAATTTAAGCTATGTATTTTTAGCTGAAAATCAAATCAGTGATATTAG TTCTTTACAACCACTTTTTAATTCACCTAATTTTTTTGGTATTACTTTAGACAATCAAAAAATAACGAGTGAACCAGTAT TGTACCAACAAGAGCTTGTGGTCCCTAATAACATTAAGGATGAAATGGGAGCGTTAATCTCACCAGATACAATTAGCGAT AATGGTGTTTATGCAAGCCCGAATATTAAGTGGAACTTGGCTAATTATACTAACCAAGTAAGTTACACATTTAATAAACA ATTAGCACAGGGTTCTTTTAGCGGAACAGTGACCCAACCACTTCACAATGCTTATACAGCGACATTTGACGTAGATGGAG TGAAAACAAATGAAGTAGTGGAAGAAACGAAATTGCTTCAAGAACCAACAGCTCCAACGAAAGAAGGATACACTTTCACA GGCTGGTATGATGCGAAAACTGGCGGGAATAAATGGGATTTTGCGACAGACAAAATGCCAGCAGAAGACATCACATTATA CGCGCAGTTCACGATTAATAGCTATACAGCCACATTCGATATCGATGGGAAATTAACGACGCAAAAAGTCACTTATCAAA GCTTGCTAGAAGAACCAGCAGCGCCAACGAAGGATGGCTATACGTTCATAGGTTGGTATGATGCTAAAACAGGTGGAACT AAATGGGATTTTGCGACAGACAAAATGCCAGCTGGAAATATAACGCTATACGCCCAGTTTACTAAAAATGCCACCCCAGA TTCCAATGACCCAACAACGGTTACCCCAACAGGAAATGGCAATGGGACAAGTACCCCAAGCAATTCAGGTGGAAATGCCA CGCTTCCGACAGCTGGGGACGAAAATACCATGCTTCCAATTTTTGTAGGAGTTTTCTTGTTAGGAACAGCAACGCTTATT CTCCGCAAAACAATCAAAGTAAAATAA Protein sequence : MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATLNKPSTTSDVSQAELDSISEV TAESSNIASLEGAQYLNNIDTLILNNNKITDLNSLAGLSKLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVS NLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVVPNNIKDEMGALISPDTISD NGVYASPNIKWNLANYTNQVSYTFNKQLAQGSFSGTVTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFT GWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGT KWDFATDKMPAGNITLYAQFTKNATPDSNDPTTVTPTGNGNGTSTPSNSGGNATLPTAGDENTMLPIFVGVFLLGTATLI LRKTIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 0.0 | 90 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 3e-139 | 60 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 1e-139 | 60 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 4e-138 | 59 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 4e-101 | 50 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 1e-102 | 50 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 7e-103 | 50 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 1e-96 | 50 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 1e-96 | 50 |
