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Name : inlC2 (LMOSLCC2540_0274) Accession : YP_006677817.1 Strain : Listeria monocytogenes SLCC2540 Genome accession: NC_018586 Putative virulence/resistance : Virulence Product : internalin C2 Function : - COG functional category : - COG ID : - EC number : - Position : 290129 - 291775 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGAAAAAACGATGGAATTCTGTATTTAAACTAGTTTTAATGGTAGCTGCTATTCTCGGTATTAGTCTATATGTAACGAC AAGTCAAGGTGCGGAGGTTCGCGCGGAAAGCATTGCGCAGCCAACCCCAATTAATGTTATTTTCCCTGATCCGGCTCTTG CGAATGCAGTTAAAACAGCCACTGGAAAATCTAATGTAACAGACACTGTTACGCAAGCAGATTTAGATGGAATAGCTACT TTATCAGCATTTAATACTGGAGTAACAACGATAGAAGGAATACAATACTTAAATAATTTGATAGGGTTAGAACTTAAAGA TAACCAAATAACTGATTTAACTCCTCTTAAAAATTTAACGAAAATAACAGAGCTTGAATTATCTGGAAATCCGTTAAAAA ATGTGAGCGCGATTGCTGGGTTACAAAGCATTAAAACGCTAGATTTAACTTCTACGCAAATTACAGATGTGGCTCCACTT GCAGGTCTTTCCAATTTGCAGGTATTATATTTGGACCTCAATCAAATAACCGATCTAAGTCCGCTCGCAGGACTAACTAA TTTACAATACTTATCAATCGGAAATAACCAAGTAAATGATTTAACCCCACTTGCTAATTTATCTAAACTAACGACTTTAA GAGCTGATGATAATAAAATAAGTGATATTTCGCCACTTGCGAGTTTACCGAACCTTATAGAAGTTCATTTGAAAGATAAT CAAATTAGTGATGTCAGCCCACTTGCTAATTTATCGAACTTATTTATAGTCACTTTAACAAATCAAACAATTACCAACCA ACCCGTGTATTATCAAAATAATCTTGTCGTTCCTAATGTAGTAAAAGGTCCTTCTGGCGCGCCTATTGCACCTGCTACTA TTAGCGACAATGGAACATACGCTAGTCCAAATTTAACATGGAATTTAACTAGTTTTATTAATAATGTTAGCTACACGTTT AACCAATCAGTCGCTTTCAAAAATACAACGGTTCCTTTCAGTGGAACAGTTACCCAACCATTAACAGAAGCTTACACTGC GGTTTTTGATGTGGATGGAAAACAAACAAGTGTGACAGTCGGCGCGAATGAATTAATTAAAGAACCAACAGCACCAACGA AAGAAGGTTACACATTCACAGGCTGGTATGATGCCAAAACTGGCGGGAATAAATGGGATTTCAGCACGGACAAAATGCCA GCAGAAAATATCACATTGTATGCGCAGTTCACGATTAATAGCTATACTGCCAAATTTGACAATGATGGAAAAATAACGAC GCAAAAAGTCACTTATCAAAGTCTGTTAGAAGAACCAGCAGCGCCAACGAAAGCAGGTTATACGTTCAAAGGTTGGTACG ATGCTAAAACGGGTGGAACTAAATGGGATTTTGCTACTGGTAAAATGCCGGCGGGAAATATTACACTATATGCCCAATTC ACTAAAAATGATAGCCCAAATCCAAATGATCCAACTCCTAATACCCCAACAGGAAATGGTGATGGTACAAGTAATCCAAG TGATTCAGGCGGTAATACCACACTTCCAACAACTGGGGACGAAAATACTATGCTTCCAATTTTTATCGGAGTTTTCTTGT TAGGGACAGCAACGCTAATTCTCCGCAAAACAATCAAAGTGAAATAA Protein sequence : MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTATGKSNVTDTVTQADLDGIAT LSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPL AGLSNLQVLYLDLNQITDLSPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDN QISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTF NQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMP AENITLYAQFTINSYTAKFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQF TKNDSPNPNDPTPNTPTGNGDGTSNPSDSGGNTTLPTTGDENTMLPIFIGVFLLGTATLILRKTIKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 0.0 | 95 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 0.0 | 94 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 0.0 | 94 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 2e-131 | 70 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 8e-132 | 70 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 2e-132 | 70 |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 1e-148 | 61 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 2e-100 | 49 |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 3e-100 | 49 |
