|
Name : polA (LMOSLCC2540_1645) Accession : YP_006679188.1 Strain : Listeria monocytogenes SLCC2540 Genome accession: NC_018586 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 1632441 - 1635098 bp Length : 2658 bp Strand : - Note : - DNA sequence : GTGAATGACAATATCGAGGAGGATATCCCTGTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCCTT TTATGCTTTACCGCTTTTAAATAATGATAAAGGTGTTTACACAAATGCGGTGTATGGTTTCGCAATGATGTTGATGAATG TACTCGAAAAAGAAAAACCTAGCCATGTGCTCGTTGCATTTGATGCTGGGAAAACAACTTTCAGACATACAACATTTAAA GGTTATAAAGGCGGACGTCAAAAAACCCCAAGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAACTTTTAACGGCGTA TGATATCCCGCAATATGAACTTGCCAATTATGAGGCAGATGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGACG GAATGGAAGTAGCAATCATTACCGGAGACCGGGACTTAACGCAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAA AAAGGCATAGCCGATATGGAAACCAACACACCAGAAACACTAAAAGAAAAATACAATCTGACTCCTCAACAAATCATTGA TATGAAGGGTTTAATGGGTGATTCCTCCGATAATATTCCTGGTATTCCAGGCGTTGGTGAAAAAACTGCCTTAAAACTCC TACATGAATTTGGTGGAACGGTGGAAAGTGTGTTAGAGCATGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTA CTGGAAAATAAAGAATTAGCTATTTTAAGTAAAGAGTTAGCTACAATCAATGTGGATTCACCGATTGAATGCACGGTCGA AAGCACGAAATACGACGGCTATCAAACAGAAAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAA ATATCGAGGGAGATACACCAGAAGAAACGAAAGAACTAAAAGAGTTGTCTTTTGAAATCGTAACAGAATTAAAAGAAAAA CATTTTGGTGGGAAAACCGCGCTTTATGTGGAGCTAGAAAACGATAATTACCATACAGCTAATTTCATTGGATTAACAGT ACATTCTAGCCAAGGGACGTATTTCTTTACAAAAGAAACAGCCGAAAGTAGTGAGGTATTCCGCAAATGGGTAGAAAGTG ATCAAACAAAAGTAGTGTACGATGCGAAGAAAACAATGGTTGCAATGAACCGCATTGGTTTGGCCATTTCTGGTATCACC TTTGATATCATGTTAGCATCTTACTTGCTAAATCCATCTGATTCGATTGATGACTTTACAAGTGTTGCAATACGACATGA TTACACAGAAGTAGAAACAGATGAAGCAGTCTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGG CACACTTAGCTAGAAAAGCAGTGGCTATTGCTGACTTAGAGAAAAGACTAGTTGATGATTTAGAAGAAAATGAACAACTA GCTTTGATGGAAGACCTTGAGCTACCTCTAACTTTTGTATTAGCAGAAATGGAAATGCAAGGGGTTAGTGTAGATACAGA ACGTCTAGAGAATACGAAAGTGGAGCTAGCGGGTAGACTGAAAACATTGGAAGAGTCGATCCATTCTCTAGCAGGCGAAG AATTCAATATTAATTCACCGAAACAACTAGGTGTGATTTTATTTGAAAAGCTTGGTCTCCCAGCTGTCAAGAAAACAAAA ACAGGTTATTCAACGGCTGCCGATGTACTGGAAAGTTTATCTGGTAAACACGCGATTATTGATGAAATTTTGTTATATCG TCAACTTGGCAAAATTCAGTCCACTTATATCGAAGGGCTGCTTAAAGTGACAGATAAAGAAACACATAAAGTACACACAC GTTTCAACCAAACATTAACGCAAACAGGACGCTTAAGTTCAGTTGATCCGAACTTGCAAAATATCCCTATTCGTTTAGAA GAAGGACGGAAAATTAGACAAGTTTTCGTACCGAGTAAACCAGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGA GCTGAGAGTCTTAGCACATATTTCGGAAGATGAAAATTTAATTTATGCATTTAAGCACGATTATGATATTCATACGAAAA CGGCGATGGACGTGTTTCATGTTGAGCAAGACGAAGTGGATTCATTAATGCGTCGTCAGGCTAAAGCGGTAAACTTTGGT ATTGTATATGGAATTAGTGATTATGGGCTTTCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCG TTATTTTGTGAGCTATCCAGCCGTGAAAGAATATATGCAAGATATCGTTCGTTTTGCGAAAGAAAAAGGCTATGTAGAGA CCATTTTACATCGTCGTCGGTATATTCCAGAGATTGTCAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACGGCG ATGAACACGCCTATTCAAGGTAGTGCCGCTGATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGA AAAATTAGAAGCAAAATTATTACTACAAGTACACGATGAATTAATCTTCGAGGCGCCTGAAGCTGAAATCGCTAAATTAG AAGAAATTGTCCCAGATGTTATGGAAAATGCAGTAGAGCTTTCTGTACCGCTAAAAGTAGATAGCGCATTTGGTGACACT TGGTACGACGCGAAATAA Protein sequence : MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFK GYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITK KGIADMETNTPETLKEKYNLTPQQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELSFEIVTELKEK HFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGIT FDIMLASYLLNPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQL ALMEDLELPLTFVLAEMEMQGVSVDTERLENTKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTK TGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLE EGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFG IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTA MNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDT WYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
