Gene Information

Name : arsB (LMOSLCC2540_1351)
Accession : YP_006678894.1
Strain : Listeria monocytogenes SLCC2540
Genome accession: NC_018586
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1338448 - 1339743 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGATTACTTTAGCTATTTTAGTATTTGCCTTCACGTTATTTTTGGTGATTTGGCAACCAAGAAAATTATCAATCGG
ATGGTCAGCTTGCGGAGGTGCGCTTATTGCCATATTACTTGGCGTCGTCACTTTATCAGATGTCGCAACAGTTACTGGAA
TTGTTTGGAATGCGACGCTCGCTTTTATTGCTATTATAATTATTTCATTGATTTTAGATAAAATTGGCTTTTTTGAGTGG
GCGGCTTTACATATGGCGCGATTAGCAAGAGGTAATGGGTTATTAATGTTTATTCTTATTTCTATTTTGGGAGCTTTCGT
TGCTGCTTTGTTTGCTAATGACGGGGCGGCGCTAATTTTGACACCAATTGTTCTAGCGATGGTGCGAGCGCTGAATTTTG
ATGAGAAAAAGGTATTTCCATTTATTATTGCTAGCGGTTTTATAGCAGATACGACGTCCTTGCCGCTCGTAGTTAGTAAT
TTAGTCAATATAGTTTCGGCTGATTTTTTCGGTATTAGTTTTTCGCAGTATGCGCTTATTATGTGGATTCCAACGGTTTT
CTCTTTAGTTGCGAGTATATTAATCTTATATTTTTATTTTCGGAAAGCATTACCTAAAAAATATGATACGCGAGTGATTC
GAGAGCCGGCTTCTGCAATTAAAGATAAAAAGATGTTTCGTGTTTCTTGGGGAATACTTATCATCCTTGTAGCAGGCTAT
TTTTTGAGTAGTTTTTTAGATATTCCAGTGTCATTTATTGCCTTGCTAGTTGCTGTTATCTTTTTGTTAGTCAGTGCAAA
AAGTCATGCGGTCTCGACAAAAGCTATTTTAAAAGGAGCACCTTGGAATATTGTGTTTTTCTCGGTTGGTATGTATGTAG
TTGTATATGGTTTGCAAAATGTCGGTATCACAAAATTATTATCAGAAGCAATTACATATGTTGCGCACTTTGGTTTATTT
GCGGGAACAGTTGGAATGGGATTTATTGCTGCAATACTGTCTTCTGTCATGAATAATTTGCCAACAGTAATGATAAATGC
ACTTGCAATCGATCATACGTCATTTACAGGCGTGATGAAAGAAGCGTTAGTCTACGCAAATGTCATTGGTTCTGATTTAG
GTCCGAAAATAACACCAATTGGCTCGCTAGCAACTTTACTTTGGCTACATGTTCTAGCGCAGAAAGGGATAAAGATAAGC
TGGGGCTCTTATTTCAAAATTGGCATTGTGATTACTATTCCAGTTTTATTCATAACGCTCGTCGGACTATATTTTTCACT
GCTTATTTGGAATTAA

Protein sequence : 
MQITLAILVFAFTLFLVIWQPRKLSIGWSACGGALIAILLGVVTLSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEW
AALHMARLARGNGLLMFILISILGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN
LVNIVSADFFGISFSQYALIMWIPTVFSLVASILILYFYFRKALPKKYDTRVIREPASAIKDKKMFRVSWGILIILVAGY
FLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAILKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF
AGTVGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS
WGSYFKIGIVITIPVLFITLVGLYFSLLIWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-124 67
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-119 66
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-119 65
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 8e-99 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_006678894.1 arsenical pump membrane protein BAC0574 Protein 6e-122 66
arsB YP_006678894.1 arsenical pump membrane protein BAC0575 Protein 9e-121 66
arsB YP_006678894.1 arsenical pump membrane protein BAC0578 Protein 3e-99 58
arsB YP_006678894.1 arsenical pump membrane protein BAC0576 Protein 1e-99 58
arsB YP_006678894.1 arsenical pump membrane protein BAC0577 Protein 2e-99 57
arsB YP_006678894.1 arsenical pump membrane protein BAC0031 Protein 3e-96 56