Gene Information

Name : LMOSLCC2540_1256 (LMOSLCC2540_1256)
Accession : YP_006678799.1
Strain : Listeria monocytogenes SLCC2540
Genome accession: NC_018586
Putative virulence/resistance : Unknown
Product : phage terminase, large subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1250605 - 1252248 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
ATGATATCAAATAAACACGTTGATAACTATATACAGTCGTATGAAAGTGGAAAAATACTACTCAATAAAGAACGAATCGA
TCTAATAAACTACTTACAAGAACATGTTCTTAGTAGAGATGATATATATTTTGATGAGACGCAAATAGAAAATTATATTG
CTTTTAGTGAAAAATGGTACTTTTCTTTGGATAACTGGGAAAAGTTTATTGCACCATTTATTTTTTTATATTTTAAAGAA
GACAATGAACTGTTTTATGAAGAGTTCTTTATAACACTTGGTCGCGGTGGCGGTAAGAACGGGTTTATAAGTACATTATC
AAATTATTTTATAAGTCCGCTACATGGGATTAACAATTACGATGTTTCGGTAGTAGCGAATTCCGAAGACCAAGCGAAAG
TTAGTTTTAAAGAAGTATTTAATACAATAGACGGAAATCCTAAATTGGAAGGCAGCTTTGACGCATGGAAAGCACAGATT
ATTGGCAAAGGAACCAACAGTGTTTTTAAATTTCAAACGTCAAATGCAAAAACTAAAGATGGTGGTCGTGAAGGCTGTGT
TATTTATGATGAAACTCATGAATATGAAGATAGACAAATAATTGATGTATTCTCTGGAGGACTTGGCAAAGTCGCGAATC
CCAGAGAATTTTTTATTGGCACCAATGGATTTGTGAGAGCGGGATTTTATGACAAGTTGGAAGAACGTAGTAAAGCAATT
TTAAGTGGTAAAAATCTTAACGACCGCATGTTTCCTTTTATTTGTAAGCTAGATGATCCAGAGGAAGTTAAGAATGAAGC
TATGTGGGAAAAAGCAAATCCTGCTTTTGAAAAGCCATTAAGTCCTCGTTCTAAACGCTTACTAAATAAAGTTAGAAAAC
AATATGAAGCATTAACGAACAATCCAAGCGGCAGAGAAGCATTCATGACTAAACGAATGAACCTTCCAGAAGTAGACTTG
GAAAAGGTAGTAGCACCGTGGGAAGATATTCTCGCAACTAACAGAGAAATGCCAGAACTCCAAAACCGAGCTTGTATTGG
TGCGTTTGACTATGCAAGCGTTAAGGACTTTGCGGCTGTTGGATTGCTGTTTCGTGTAGGCGACGATTATATTTGGAAAA
CACATTCCTTTGCTAGAAAAGGATATTTGGATATCGCAAACCTTAAACCGCCCATTAAAGAATGGGAAAAACAGGGATTA
TTGACCATTGTAGATGAACCTACAATCGACCCTCGTCATGTGGTCAATTGGTTTGTTGAAATGCGAGAAACATACGGTAT
TCAAAAAGTAATCGGAGATAATTTCCGAATGGATCTCATGCGTCCGCTGTTTGAAGCAGAAGGATTTGAACTGGAGATTA
TTAGAAATCCACGTGCAGCTCATAGTTTGCTAGCTCCGCGAATTGAAACACTATTTGCTAATCATCGTATTGTGTTTGGA
GATAATCCGTTAATGCGATGGTATACAAATAATGTTGCAGTGAAAATCAAACCGGATGGAAATAAAGAGTATCTTAAAAA
AGACGAGCATAGACGTAAAACTGATGGATTTCAGGCTTTTGTCCATGCTCTTTGGCGTGCGGATGAAATAGAAGATATTG
ATGTAGAAGAGGTATTGAACATGCTTAACGCGATTGCGTTTTAG

Protein sequence :
MISNKHVDNYIQSYESGKILLNKERIDLINYLQEHVLSRDDIYFDETQIENYIAFSEKWYFSLDNWEKFIAPFIFLYFKE
DNELFYEEFFITLGRGGGKNGFISTLSNYFISPLHGINNYDVSVVANSEDQAKVSFKEVFNTIDGNPKLEGSFDAWKAQI
IGKGTNSVFKFQTSNAKTKDGGREGCVIYDETHEYEDRQIIDVFSGGLGKVANPREFFIGTNGFVRAGFYDKLEERSKAI
LSGKNLNDRMFPFICKLDDPEEVKNEAMWEKANPAFEKPLSPRSKRLLNKVRKQYEALTNNPSGREAFMTKRMNLPEVDL
EKVVAPWEDILATNREMPELQNRACIGAFDYASVKDFAAVGLLFRVGDDYIWKTHSFARKGYLDIANLKPPIKEWEKQGL
LTIVDEPTIDPRHVVNWFVEMRETYGIQKVIGDNFRMDLMRPLFEAEGFELEIIRNPRAAHSLLAPRIETLFANHRIVFG
DNPLMRWYTNNVAVKIKPDGNKEYLKKDEHRRKTDGFQAFVHALWRADEIEDIDVEEVLNMLNAIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1775 YP_253690.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-166 59
SA1777 NP_375075.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-157 57
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 5e-157 57
SAUSA300_1941 YP_494592.1 phi77 ORF003-like protein, phage terminase, large subunit Not tested ¥ÕSa3 Protein 5e-157 57
SAOV_1101 YP_005736596.1 Phage terminase large subunit Not tested ¥ÕSa2 Protein 4e-157 57
SAKOR_01945 YP_008492133.1 Terminase large subunit Not tested ¥ÕSa3 Protein 5e-157 57
SAV1966 NP_372490.1 phage terminase large subunit Not tested ¥ÕSa3 Protein 5e-157 57