Gene Information

Name : LMOSLCC2540_1202 (LMOSLCC2540_1202)
Accession : YP_006678745.1
Strain : Listeria monocytogenes SLCC2540
Genome accession: NC_018586
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1208988 - 1209689 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTATGTAGAAATGAAAGATGTATCTAAATACTATCAAATGGGCGAGAACGTTGTCACGGCAAATGATAAAATCAC
TTTCGGGATAAAAAAGGGTGAATTTGTTGTAATAGTCGGACCTTCTGGAGCCGGAAAATCCACTGTACTTAATATACTTG
GTGGAATGGATAGTGCAAGTGAAGGCAAAATTATGGTAGATGGGCAGGATATTGCTCAATATAATGCAAAACAATTAACC
AAATATCGGCGAACAGATGTCGGCTTTGTATTTCAATTTTACAATTTGGTACCCAATTTGACTGCTAAAGAGAACGTAGA
ATTAGCTGCACAAATTGCGCCAAATGCATTAGACGCAGAAACTGTTTTAACTCAAGTTGGATTAAGTCACAGATTAGACA
ATTTTCCAGCACAACTATCTGGCGGGGAACAACAGCGTGTCGCCATAGCACGTGCGCTTGCTAAAGCACCGAAACTGCTT
TTATGCGATGAGCCAACCGGGGCACTTGATTACGATACTGGAAAATCAGTCTTAAAATTATTACAAGAAACTTGCCGTAA
CACGGGAACAACCGTTATTGTTATTACCCATAACACAGCGATTACGCCAATTGCAGATCGAATTATTGAAATTAATAATG
CAAAAGTTCGCAGCATCAAAGAAAATCCAGAACCAATGTCGATTGATGATTTAGAATGGTAG

Protein sequence : 
MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGAGKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLT
KYRRTDVGFVFQFYNLVPNLTAKENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLL
LCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRSIKENPEPMSIDDLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2540_1202 YP_006678745.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-67 64
LMOSLCC2540_1202 YP_006678745.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-37 44
LMOSLCC2540_1202 YP_006678745.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-38 42
LMOSLCC2540_1202 YP_006678745.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-29 41