Gene Information

Name : metC-1 (LMOSLCC2378_1700)
Accession : YP_006676369.1
Strain : Listeria monocytogenes SLCC2378
Genome accession: NC_018585
Putative virulence/resistance : Resistance
Product : cystathionine beta/gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1716690 - 1717862 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAATGAATATGCGCAAGATACGGCTGTGATTAAAGCGAGCCTCGGGATTGATAAAGAGACAGGTGCGCTTAATAC
GCCAATTCATTTATCGTCTACTTTCCATCAGCATGACTTTGATAATTATCACGCTTATGATTATGCGAGAAGTGGGAACC
CAACGAGAGAAAAAGTGGAACAAGCGATTGCGGAACTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGGATGGCG
GCTGTTTCTGCAGCGCTCTTTACTCTTTCTAAGGGAGACCATTTTATTATTGCGAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAGCAAGTGTTGCCACGTTTTGGGATTACGCATACTTTTGTTGATACGACAAATATTGACGAAGTTGCGAAGG
CATTTCAAGCGAATACGAAACTGATTTACTTGGAAACACCTTCTAATCCGTTGCTGCATGTGACAGATATTCGGACTGTT
GCAAAACTTGCGAAAGCGAATGGGTGTTATACGTTTGTTGATAATACATTTTTGACGCCGTTAATTCAAAAACCGTTAGA
ATTAGGTGCAGACTTGGTTATTCATAGTGCGACGAAATTTCTTGGAGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CCAATAATCCTAATCTGGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACAGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTGGCAGTGCATTATCCGGGGTTACCTTCTCATGCGGGTTATGACATTCAAGTGGAACAGG
CGACAAGTGGCGGGGCCGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCTGTGCGAGAACTAGTAACACATTTGGAATTG
CCGGTATTTTCTGTGAGTTTGGGCGCGGTGGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAGCGTTTGGCGCAAGGAATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCCGATGACTTGATTG
CTGATTTAAAACAAGCACTTTCTTTCATTAAGAAGGGAAGTGTTGCGAAATGA

Protein sequence :
MANEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLIYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-75 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-76 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-75 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC-1 YP_006676369.1 cystathionine beta/gamma-lyase BAC0207 Protein 1e-54 44