|
Name : clpE (LMOSLCC2378_1015) Accession : YP_006675684.1 Strain : Listeria monocytogenes SLCC2378 Genome accession: NC_018585 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1028034 - 1030202 bp Length : 2169 bp Strand : - Note : - DNA sequence : ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTAGAAATGCC GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCCAACTTTGGCGCAAATGAGTTTCCGGGAGCTAGCGGTTCCC CGTTTGACGATATTTTCCGTCAATTAAGTGGTGCTGCAAACCAAGCAAACCGTGAACAAAGAAACCAAGCACAAGTACAA ACACAAACTGCTGGTGGCGGCAATGGTTTACTAGATGAATTTGGAACAAACTTAACAGATATGGCGAAAAATGAGCAACT CGACCCTGTCATCGGTCGTGACAAAGAAATTAAACGCGTCATTGAAATATTAAACCGCCGTAATAAAAATAATCCAGTCT TAATTGGTGAACCAGGTGTTGGTAAAACAGCTGTCGTCGAAGGACTTGCAAATGCGATTGTCGCAGGAGAAGTTCCAAGC AAATTAATGAACAAAGAAGTTATCTTATTAGATGTCGCTTCACTTGTTTCTGGAACAGGGATACGCGGTCAATTTGAAGA ACGCATGAAACAACTGATTAAAGAACTACAAGAACGTAAAAACACAATTCTCTTTATTGATGAAGTGCATACGATTGTTG GGGCAGGTTCCGCAGAAGGCTCGATGGATGCAGGAAACATTCTAAAACCAGCTCTAGCTCGTGGCGATTTACAAATGATT GGTGCTACTACACTAAAAGAATACCGCACAATCGAAAAAGATGCCGCACTTGAGCGCCGTTTCCAACCAGTAACTGTAAG CGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATATGAAGATTTCCATGAAGTAGTTTATT CACCAGAAGCACTAACAGCAGCAGTTGAATTAAGCGCTCGTTATATCCAAGATCGTCATTTGCCAGATAAAGCAATTGAT TTAATGGATGAAGTTGGCTCGAAATATAATCTATCCATTGAAAAACTGGACGAAAATACGGTGAGCGAACGTGTTGCCCG TTTAGAAGATGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCCAAAGTTCGTGATGAAATTACTCGCT TAGAAGAAAATAAAACAAATAACTCCTTCTCAGAGCGTCCAGTCATCCAAGCATCCGACATCCAAGCAATTATTGAAGAA AAAACAGGTATTCCAGTAGGACGCTTACAAGAAGACGAGCAATCTAAAATGAAGAACTTAGAAAGTAACTTAACTGGAAA AGTCATTGGTCAAGAAGATGCTGTAAGAAAAGTAGCTAAAGCAATTCGTCGTAGCCGTGTTGGCCTCAAATCAAAAAATC GCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGACGCACGCTAGCTCGTGAATTG TTTGGTACTAGTGAAGCGATGATTCGTTTAGACATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAATTAATCGGTTC CCCTCCTGGCTATGTTGGTCACGAAGAAGCTGGACAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCATTTTGT TAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTCCTGCAAATTTTAGAAGACGGTCGACTAACTGATTCA CAAGGACGTACAGTGAGCTTTAAAGATACAGTCATCATTATGACAAGTAACGCTGGCGCAACTGACACAGAAGCTTCTGT CGGCTTTAATACAACAACCGAAGCAAAACTTGAAAAAGGTTCTGACATCTTAGCAAAATTAGGCGCATACTTCAAACCAG AATTCTTAAACCGTCTAGACAGCGTCATTGAATTTAAATCTCTAGAAAAAGACGATTTAGTACAAATTATCGACTTAATG CTCGTTGATTTAAATGAAATGCTCGCTCAAGAAGATGTGACAATCGATGTTTCCAAGGAAGTGAAAGAACATTTGATTGA CCTTGGTTATGACCCTAAATTCGGAGCACGTCCACTACGCCGGACTATCCAAGAACACCTAGAAGATGCGATTGCCGACA GTCTAATTGAACAACCAGAAGCAAAACATCTTGTTGCAACCCTTAACGAAAATAAAGAAATTACTATAACAGAACAAGTA ACAGTGTAA Protein sequence : MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGANEFPGASGSPFDDIFRQLSGAANQANREQRNQAQVQ TQTAGGGNGLLDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEVPS KLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMI GATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAID LMDEVGSKYNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTNNSFSERPVIQASDIQAIIEE KTGIPVGRLQEDEQSKMKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAREL FGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDS QGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTEAKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIIDLM LVDLNEMLAQEDVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDAIADSLIEQPEAKHLVATLNENKEITITEQV TV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-155 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_006675684.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 98 |
| clpE | YP_006675684.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 7e-160 | 53 |
