|
Name : gabD (LMOATCC19117_0935) Accession : YP_006672736.1 Strain : Listeria monocytogenes ATCC 19117 Genome accession: NC_018584 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 963282 - 964748 bp Length : 1467 bp Strand : + Note : - DNA sequence : TTGAGTATTAAAGAAACAGCCTTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAATGGAGAAGTTATTGCCAAAATCGCTCAAGCTGGACCAAACGAAACCAAAA AAGCCATTAAAGCTGCAAAAGAAGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGATCGCGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACACTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCCTAACTGGCGCAGAAAACTTCCGATTCGCTGCAGAAGAAGCAAGAAGATTATATGGGGAAACTATCC CAGCGCCAAACAATCACGCGTTTATCGTCAAAAAACAACCAATTGGTGTAGTTGCGGCCATTACTCCGTGGAATTTCCCA GGTGGTATGGTGACACGAAAACTTGCTCCAGCGCTTGCAACCGGAAATACAATCGTATTAAAACCTTCCGGAGATACGCC GCTTTCGGCCCTAGCTATCTTTGAAATTTTTGAAGAAGCCGGCTTGCCAAAAGGTGTTGCCAATATCGTTATGGGTAGCT CCAAAGAAATCGGTGAAACATTAACTGACAGTGATGATGTTCGTAAACTAACTTTCACCGGCTCCACGAAAGTCGGTCAA ACACTATTCAAACAATCAGCCGAAACACTGAAAAAAATCTCGCTCGAACTTGGTGGACATGCGCCATTTATCGTATTTGA TGATGCAAACCTGGATGCTGCTGTAAATGATTTAGTTGCCGCAAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTAGTTGCCAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCTAAAGTAGAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAATGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCCTAACTGGCGACGGTCGTTTAACAGGTTCCGACTATGACAAAGGCAACTTCTACAAAC CAACTGTCTTAGATAACGTTACCCGTGAAATGGACATTTTTTATGAGGAAACATTTGGTCCAGTAATCCCGCTTATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTACACTAAAGATTT AGCACGCGTAGAAAAAGTGGGAGCAGCACTAGAATACGGAATGGTCGGAGCAAATGAAATTGCCATCTCTAATCCGGAAA CTCCATTTGGCGGCGTTAAACATTCTGGTTTCGGTCGCGAAAATGGCCACTACGGAATGGAAGAATACATCCAAGTGAAA TTCATTAACTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRILVAKEIKEKFTKALVAKVEQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGDGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-100 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-75 | 41 |
