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Name : treC-2 (LMOATCC19117_1263) Accession : YP_006673064.1 Strain : Listeria monocytogenes ATCC 19117 Genome accession: NC_018584 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : - COG ID : - EC number : 3.2.1.93 Position : 1272682 - 1274328 bp Length : 1647 bp Strand : - Note : - DNA sequence : ATGACAAAGTTTGCTCAAAAAACAATTTATCAAGTGTATCCGAAATCCTTTTATGATACGACTGGCGATGGTACTGGGGA TATTCCCGGTATCACTGCCAAGCTTGATTATTTACAAAAACTCGGAATTGAGATGATTTGGCTGAATCCATTTTATCCTT CTCCGCAAAATGATAACGGCTATGATATCGCTGACTATACCGCGGTTGATCCTTTATTTGGTACGATGGACGATGTGACA ACGCTTATCAAGGAAGCGAAAAAAAGAAATATTGGTATTATGATTGACTTAGTATTGAATCATACTTCAACAGAGCATCC TTGGTTTAAAAAAGCGCTTGCTGGTGATCCATTCTATCGTGATTTTTACTATTTCCGCCCAGCAAAAGCCGATGGTTCCC CTCCAACAAATTGGGTTTCCAAATTCGGTGGTAATGCTTGGGAAAAATTGCCTGACTCCTCTGAGTACTATTTGCATTTA TACGATGTTACGCAAGCTGATTTAGACTGGGCCAATCCGAATGTACGCGAGGCACTCTTTGATGTCGTGAATTTTTGGAT TGATAAAGGCGTGGAAGGTTTTCGTTTAGATGTATTAAATGTGATTGCCAAACCTAAGTTTTTAGAAGATGATTTTGAAG GCGACGGCCGCCGTTTTTATACAGATGGACCAGGAATACATGCTTACTTAAAAGAACTACATGAACGAACTTTTGGCGAC AAGCCAATTATAACGGTTGGAGAAATGTCCTCTACAGATATTGACAACTGCATTCGTTATAGTAATCCAGACGAAAAAGA ATTATCGATGGTTTTTCATTTCCATCATTTGAAGGTAGACTATCCTGATGGAGAAAAATGGCGTTTAGCGGATGTGAATT TCGAGAACTTAAAATCTATTTTCCATACGTGGCAAGTCGCGATGTCAGAAGAAAATGGATGGGATGCGCTTTTCTGGAAC AACCATGACCAACCTCGAGCACTTGGTCGCTTTGCTTCCGACAAACCGGAACATTATTATCATTCGGCAACCCTCCTTGG CGCAACGATTCACTTTATGCGCGGGACACCGTTTGTTTATATGGGGGAAGAAATCGGGATGATGAATCCAAAATTTCCTA CGATTGATGATTATGTGGATGTGGAAACGCTCAACCATTTTGATATTTTACAAAAAAACGGACTTAGTGAGCAAGAAGTT ATGGCGATTATCAAAGAGCGTTCGCGAGATAATAGTCGGACACCTATGCAATGGGATGATTCGCAAAATGCTGGCTTTAC AACTGGTACTCCATGGCTAAAAGTAGCGGATAATGCAAGTGAAATAAATGTTCAAGCAGCCTTATCTAATAAAACGAGCA TTTTCTATTTTTACCAAAAGCTTATTGCATTACGGAAAGAATACCCTGTCATTCAGACGGGTGATTATACGCCATATTGG ACGGATGAAGATTTGATTATTGCCTATAAGCGTTCAAATGAAATTACTTCGCTTCTTTCCATTCACCATTTTGGCTCGAC TACGAAAAAAATTCAACTACCAAATGAGTTTTTAAATGCTAAAGTACTTCTTTCTAATTATGAACGTCAAACAATCAGTT CTGAGCTGGAATTAGCACCTTATGAAACATTAACTTTAATTCGATAA Protein sequence : MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIEMIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVT TLIKEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELHERTFGD KPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHHLKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSEENGWDALFWN NHDQPRALGRFASDKPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQKNGLSEQEV MAIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNASEINVQAALSNKTSIFYFYQKLIALRKEYPVIQTGDYTPYW TDEDLIIAYKRSNEITSLLSIHHFGSTTKKIQLPNEFLNAKVLLSNYERQTISSELELAPYETLTLIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-107 | 42 |
