Gene Information

Name : KTR9_4564 (KTR9_4564)
Accession : YP_006671349.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Virulence
Product : Transcriptional response regulators
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5219047 - 5219715 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCGTGTTCTGATCGCCGAAGACGACGCGAGGATCGCCTCGTTCATCGGCAACGGCTTGCGTGCGGCGGGATACAG
CACCGAGCACGTGTCCGACGGACTGTCGGCGCTCGAAGCCGTGCGCGGCGGCGGTTTCGACATGGTCGTCCTCGACATCG
GTCTGCCGTCGATGGACGGGTTCGACGTGCTGTACTGCATGCGAGGCGAGGGGATCACGACGCCGGTGGTCGTGCTCACC
GCCCGAGACAGCGTGAGCGACACGGTGAGTGGGCTCGAAGGCGGGGCCAACGACTACATGACCAAGCCCTTCCAATTCGC
CGAACTGCTCGCCCGAATCCGGCTCCGGCTCGTCGACGACTCGGCCGTCGCGTCGGAGAACCTGTTGGCCGCCGGGGATC
TGCGGTTGGATCTGAAGTCGCGGCGGGCGCGGGTGGGCACGGACACGATCGATCTCACCGCGCGCGAATTCGCACTGCTG
GAGGTGTTTCTCCGGCACCCCGATCAGGTGCTGTCCCGCGAGCAGATCCTCGGCCACGTCTGGGGTTACGACTTCGACCC
GGCCTCGAACGTCGTCGACGTCTATGTGCGGGCGCTCCGGAACAAGATCGGCTCGCATCGACTGGAGACGGTGCGCGGCA
TGGGATATCGGCTTCGCGCAGTCGACTAG

Protein sequence : 
MSRVLIAEDDARIASFIGNGLRAAGYSTEHVSDGLSALEAVRGGGFDMVVLDIGLPSMDGFDVLYCMRGEGITTPVVVLT
ARDSVSDTVSGLEGGANDYMTKPFQFAELLARIRLRLVDDSAVASENLLAAGDLRLDLKSRRARVGTDTIDLTAREFALL
EVFLRHPDQVLSREQILGHVWGYDFDPASNVVDVYVRALRNKIGSHRLETVRGMGYRLRAVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0125 Protein 1e-39 45
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0083 Protein 9e-44 43
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0638 Protein 3e-36 43
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0197 Protein 4e-39 42
KTR9_4564 YP_006671349.1 Transcriptional response regulators HE999704.1.gene1528. Protein 4e-33 41
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0111 Protein 6e-41 41
KTR9_4564 YP_006671349.1 Transcriptional response regulators BAC0347 Protein 4e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_4564 YP_006671349.1 Transcriptional response regulators VFG1389 Protein 4e-38 45
KTR9_4564 YP_006671349.1 Transcriptional response regulators VFG1390 Protein 1e-36 44
KTR9_4564 YP_006671349.1 Transcriptional response regulators VFG0596 Protein 1e-35 41