Gene Information

Name : KTR9_3919 (KTR9_3919)
Accession : YP_006670710.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Unknown
Product : ABC-type multidrug transport system, ATPase and permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4510451 - 4512334 bp
Length : 1884 bp
Strand : -
Note : -

DNA sequence :
GTGTCCGCGCCGGCAGCAGTCTCCGACGTCGACGCCGAACCCGACGATCCGAAAGCCGCGCGCGCCCAGGCCAGATCCGA
GTCCAAGGCGAAAGCCGCCGCGCTCGCCGACGTCCTGGCCCCGGTGAAGACGCGCACGATGCTCGCCCAGTTCGTGCAGA
TCTTCGCCTCCGCCGCAACGGTGGTGCCGTTCATCGGGATCGTCGAACTCGGGCGCATCCTGCTCGAGCCGGGACCGATC
GACTCGGGACGCGTGTGGCTGGTCGTGTGGCTGGTCGTCGCCGGTCTCGGTGCTCGCGCCGCCTTCAGTTTCCTCGCACT
GGCGATCACCCACTTCGCCGATCTCGATCTACAGGCGCAACTCCGAATCCGCATCGCGGACAAGCTCGGTCGGTTGCCGC
TGGGCTGGTTCAGCCGCACCAGCTCCGGTGCCGTCCGCAAGTCCGTGCAGAACGACGTCGCCGACCTGCACTACCTCGTC
GCGCACGCGACGGTCGAGGCGACGGCGGCGATGCTCTCGCCGATCTTCGCGTTGATCTACTGCTTCTACCTGGATTGGCG
TCTCGGACTCCTCGCCGTCGCCACGGTGCCGCTGTACGCGTTGACCTACTCCTACATGGCCCGTGACCTCACGACCGAGA
TGGAGAAGATGGACAAGGGTGTGGCGCGGATCAGTGCGACCATCGTCGAGTTCATCTCGGGTGTCGCCGTCGTGAAGACG
TTCGGCCAGACCGGTAAGGCGCACCGGCGGTTCGTCGACGCCGCCGACGAGTTCAACGACGACTTCGCCGGTTACATGGG
TCCGATGCTGCGCGTCCAGGCGGTCACCACCGTCCTGATCAGCGCGCCGCTGATCCTGCTGGTCAACCTCGGGGTCGGGT
ACTGGCTCGTCGACAACGGCTGGGTGCAGCCCATCGAACTCGTCGGCTCGACGCTGATCGCGATGGTGCTGCCGACCGCG
CTGCTCACCGTGTCCACCGCGGTGCACACCCGTCAGCAGGCCTCGGCCGCGGCGCTGCGCATCGCCGCGCTGCTCGCCGA
ACCGGAGCTGGTCGTCCCGGAGAATCCACAGGTGCCTGCCGGTCACGACGTGCGTATCGAGAACGTGCACTTCACCTACC
CGCCCCGTCTCGGGGTGCCGTCCGGGGTGAAGGCGCTCGACGACGTCAGCGTGGAGCTGGCCGAGGGCACCGTGACCGCG
CTCGTCGGGCCGTCGGGAAGCGGGAAGTCGACGCTCGCGACGCTGCTCCCGCGTTTCGGTGATCCCGACTCCGGTGCGGT
GCGTATCGGCGGGGTCGACGTGCGCGACATCGCACCCTCCGAGCTCTACCGCCACGTCGGTTTCGTGCTGCAGGACGTGC
AGCTGCTGACGATGTCGGTGCGTGACAACATTCGCCTCGGCCGTCCGGACGCGAGCGACGAGCAGGTCCACGACGCCGCC
CGGGCCGCGCAGATCCACGAGCGCATCCTGGAGCTGCCCGACGGCTACGACACCGTGGTGGGCGATGGTGCCCACTTCTC
CGGCGGTGAGGCACAACGTGTCTCGATCGCGCGGGCACTGCTCGCCGACACGCCGATCCTCGTCCTCGACGAGGCCACCG
CCTTCGCCGACCCCGAGTCCGAGGCGCAGATCCAGCAGGCCATCGGCGCGCTGATGACCGGGCGGACCGTACTCGTCATC
GCCCACCGTCTCGGCTCGATCACGCACGCGGACAACATCGTCGTCCTCGACCGGGGCCGGGTCGTCGAACAGGGCCGCCA
GGACGAACTGGTCGCCCGCGGCGGGCTGTACGCGTCGATGTGGGCCGCCTACGAGGCCGGGACCACCAGACAGGACGAGG
AGATCGCGCGCGGCGCGGTCGCGAACAGCGAGGTGGCACGATGA

Protein sequence :
MSAPAAVSDVDAEPDDPKAARAQARSESKAKAAALADVLAPVKTRTMLAQFVQIFASAATVVPFIGIVELGRILLEPGPI
DSGRVWLVVWLVVAGLGARAAFSFLALAITHFADLDLQAQLRIRIADKLGRLPLGWFSRTSSGAVRKSVQNDVADLHYLV
AHATVEATAAMLSPIFALIYCFYLDWRLGLLAVATVPLYALTYSYMARDLTTEMEKMDKGVARISATIVEFISGVAVVKT
FGQTGKAHRRFVDAADEFNDDFAGYMGPMLRVQAVTTVLISAPLILLVNLGVGYWLVDNGWVQPIELVGSTLIAMVLPTA
LLTVSTAVHTRQQASAAALRIAALLAEPELVVPENPQVPAGHDVRIENVHFTYPPRLGVPSGVKALDDVSVELAEGTVTA
LVGPSGSGKSTLATLLPRFGDPDSGAVRIGGVDVRDIAPSELYRHVGFVLQDVQLLTMSVRDNIRLGRPDASDEQVHDAA
RAAQIHERILELPDGYDTVVGDGAHFSGGEAQRVSIARALLADTPILVLDEATAFADPESEAQIQQAIGALMTGRTVLVI
AHRLGSITHADNIVVLDRGRVVEQGRQDELVARGGLYASMWAAYEAGTTRQDEEIARGAVANSEVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDPW8_2175 YP_005143723.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 7e-97 46
irp2K YP_005163491.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 4e-88 43
irp2K YP_005134503.1 lipid A export ATP-binding/permease protein msbA Not tested Not named Protein 4e-88 43