Gene Information

Name : KTR9_3487 (KTR9_3487)
Accession : YP_006670278.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Virulence
Product : ABC-type Mn2+/Zn2+ transport systems, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3975695 - 3976573 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence : 
GTGAACATCGTCGACATCCTCCTCGACCCGTTCGCGTACGCGTTCATGACCCGCGCCCTGTGGGCGACGCTGATCGCCTC
GGTCGTGTGTGCGCTCCTGTCGTGTTGGCTCGTGCTGATCGGCTGGTCCCTGATGGGCGACGCCGTCTCACATGCGGTGC
TGCCGGGCGTGGTGCTCGCCTACATCGTCGGCGTCCCGTTCGCCATCGGCGCGGTGATCTTCGGTTTCCTCGCGGTGGCA
CTGATCGGCGCGGTCCGCGATGGCGGCCGGGTGAAGGAGGACGCCGCCATCGGCATCGTCTTCACGACCCTCTTCGCCTT
CGGACTGGTCCTGATCTCGGTGACGCCGAGCCAGACCGACCTCAACCACATCATCTTCGGCAACCTGCTGGGTGTCTCGA
CGTCGGACCTGGTGCAGATCGCGATCCTGGGCGCGATCGTCGCGACGCTGCTCCTGCTGAAGCGGCGCGACTTCACCCTC
TACGCCTTCGACCGCACGCACGCCTTCGCGATCGGCCTGAGCCCGCGGCTGCTGGGCGCAGCCCTGCTCGCGCTGCTCGC
CCTCACCGCGGTGACCGCCCTGCAGGTCGTCGGCATCGTGCTGGTAGTCGCGATGCTCATCATCCCCGGCGCGACCGCGC
GACTGCTCACCGATCGCTTCGGCCGGATGCTGATCATCGCGCCCGCCATCTCGGCGATCTGCGGTGTCATCGGCCTGTAC
GTCTCCTACTACCAGGACACCTCCCCCGGCGGGATGGTCGTCCTGGTCCAGGGCATCACGTTCTTCGGTGTCTACCTGTT
CAGCCCGACCCACGGCGTGGTGACGAAGCGACGCAAGCATCGCGAGAGTGCGACCCTCGACGCGCTGAGCACCGGGTAG

Protein sequence : 
MNIVDILLDPFAYAFMTRALWATLIASVVCALLSCWLVLIGWSLMGDAVSHAVLPGVVLAYIVGVPFAIGAVIFGFLAVA
LIGAVRDGGRVKEDAAIGIVFTTLFAFGLVLISVTPSQTDLNHIIFGNLLGVSTSDLVQIAILGAIVATLLLLKRRDFTL
YAFDRTHAFAIGLSPRLLGAALLALLALTAVTALQVVGIVLVVAMLIIPGATARLLTDRFGRMLIIAPAISAICGVIGLY
VSYYQDTSPGGMVVLVQGITFFGVYLFSPTHGVVTKRRKHRESATLDALSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-46 45
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-46 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-46 45
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-46 45
sitD NP_461785.1 permease Virulence SPI-1 Protein 8e-46 45
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-50 43
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-50 43
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-50 43
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-50 43
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-50 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0441 Protein 2e-49 46
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0352 Protein 4e-46 45
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0442 Protein 9e-49 45
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0351 Protein 3e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component VFG0528 Protein 3e-46 45
KTR9_3487 YP_006670278.1 ABC-type Mn2+/Zn2+ transport systems, permease component VFG0527 Protein 3e-50 43