Gene Information

Name : KTR9_3486 (KTR9_3486)
Accession : YP_006670277.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3974907 - 3975698 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
GTGAACGCCTCAGCGACAAGCGGTTCCGCCATCGAAGTGACGGACGTGACCGTGCGGTACGGCGGCATCCTCGCCCTCGA
CCACGCGTCGGTACGCGTGCCGGCCGGCCAGGTGTGTGGCCTCGTCGGCATGAACGGTTCGGGCAAGTCGACGCTGTTCA
AGACGATCGTGGGCTCGGTGACCCCGACGACCGGCACGGTCCGGCTCGGCGGCCGGACCCCCACCGCAGCGCGTCGTGCC
GGCGCGCTCGGCTACGTACCGCAGTCGGAGGACATCGACTGGAGCTTCCCGATCTCGGTCCGCGACGTCGTGATGACCGG
TCGCTACGGCCACCTCGGGTTCACGCGCCGACCGAAGCGGGCCGACCACGACGCCGTCGACGAAGCCCTGGCGCGCGTCG
AACTCACCGACTTCGCCGACCGCCAGATCGGCCGGCTGTCCGGCGGTCAGCGCAAGCGGGCCTTCGTCGCCCGCGGCATC
GCGCAGGAAGCGGGGATCCTGTTGCTCGACGAGCCGTTCGCCGGTGTCGACAAACGCACCGAGGCCACCATCACCGCGCT
ACTGCGCGAACTCGCCAACGCCGGGACGACGATCCTGGTCTCGACGCACGACCTGCAGGTCCTGCCGGAGCTGGCCGACG
AGGCGATCCTGCTGATGCGCCGGGTGATCGCGCAGGGCGCGCCGACCGAGGTGATCACCGCGGAGAATCTCGTCCGCGCG
TTCGGTCTCGATCCCCTCGCCCGACCGACTTCGGAACGCCACGGCTCCGAGCATCCCGAGGAGGTCGCGTGA

Protein sequence : 
MNASATSGSAIEVTDVTVRYGGILALDHASVRVPAGQVCGLVGMNGSGKSTLFKTIVGSVTPTTGTVRLGGRTPTAARRA
GALGYVPQSEDIDWSFPISVRDVVMTGRYGHLGFTRRPKRADHDAVDEALARVELTDFADRQIGRLSGGQRKRAFVARGI
AQEAGILLLDEPFAGVDKRTEATITALLRELANAGTTILVSTHDLQVLPELADEAILLMRRVIAQGAPTEVITAENLVRA
FGLDPLARPTSERHGSEHPEEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-52 52
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-53 52
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-53 52
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-52 52
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-52 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3486 YP_006670277.1 putative ABC transporter ATP-binding protein BAC0350 Protein 5e-53 52
KTR9_3486 YP_006670277.1 putative ABC transporter ATP-binding protein BAC0440 Protein 7e-52 47
KTR9_3486 YP_006670277.1 putative ABC transporter ATP-binding protein BAC0400 Protein 1e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3486 YP_006670277.1 putative ABC transporter ATP-binding protein VFG0526 Protein 5e-53 52