Gene Information

Name : KTR9_3485 (KTR9_3485)
Accession : YP_006670276.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Virulence
Product : ABC-type metal ion transport system, periplasmic component/surface adhesin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3973987 - 3974910 bp
Length : 924 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCAAGCCCGCGCGTCGTCGGTTCCTCACCGCAGGGGCACTCCTCGCCGCCGTCTGCACGGTCCTCGCCGGTTGCAC
GCTGTCGAGCCGGCTACCCGACGAGAAGGTCGTACTCACCACGTTCACCGTGCTCGCCGACATCGCCTCCGAGGTCGCCG
GCGATCGCCTCGAGGTGGAGTCGATCACCAAGCCGGGAGCCGAGATCCACGGCTACGAGCCCACCCCAGGTGACATCCGG
CGCGCCGCGACCGCCTCGCTGGTCCTCGACAACGGGCTCAACCTCGAAGCCTGGTTCGCGCAGTTCGTCGACGGACTCGA
CGTCCGGCACGTGGTCGTCAGCGAGGGCATCGAGCCGATCGACATCGCGTCGGATGCCTACGCGGGCAAACCCAATCCAC
ACGCGTGGATGAGTCCGGTCAACGTCCAGATCTACGTCGACAACATGGTCCGCGCGTTCACCGAGCTCGACCCCGACGGC
GCCGCCACCTTCGAATCCAACGCGGCCGCATACAAAAAACAGCTGCAAGAGGTGCAGACCGACCTCACCTCCGCCCTGGC
CGGGCTATCCGCCAACGAAAGGGCGCTTGTGACGTGCGAAGGCGCGTTCTCCTACCTCGCCCGCGACGCCGGACTCACCG
AGCGCTACATCTGGCCGGTCAACGCCGAGCAGCAGGCGACGCCGCAGCAGGTCGCCGAGACGATCGACTTCGTGCGGGCC
AACCGCGTCCCCGGCGTGTTCTGCGAGTCCACGGTGTCCGACGCCCCGATGAAGCAGGTCGTGAACGCGACCGACGCCCG
TTTCGGCGGGACCCTGTACGTCGATTCGCTCTCCGAAGCCGACGGCCCCGTACCCACCTACCTCGACCTCATCCGCCACG
ACGTCGCGACCATCGTGTCGGGCCTGACCGGGAGCAATACGTGA

Protein sequence : 
MPKPARRRFLTAGALLAAVCTVLAGCTLSSRLPDEKVVLTTFTVLADIASEVAGDRLEVESITKPGAEIHGYEPTPGDIR
RAATASLVLDNGLNLEAWFAQFVDGLDVRHVVVSEGIEPIDIASDAYAGKPNPHAWMSPVNVQIYVDNMVRAFTELDPDG
AATFESNAAAYKKQLQEVQTDLTSALAGLSANERALVTCEGAFSYLARDAGLTERYIWPVNAEQQATPQQVAETIDFVRA
NRVPGVFCESTVSDAPMKQVVNATDARFGGTLYVDSLSEADGPVPTYLDLIRHDVATIVSGLTGSNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-74 55
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-73 54
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-73 54
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-73 54
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-74 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3485 YP_006670276.1 ABC-type metal ion transport system, periplasmic component/surface adhesin BAC0349 Protein 5e-74 54
KTR9_3485 YP_006670276.1 ABC-type metal ion transport system, periplasmic component/surface adhesin BAC0439 Protein 4e-69 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_3485 YP_006670276.1 ABC-type metal ion transport system, periplasmic component/surface adhesin VFG0525 Protein 4e-74 54