Gene Information

Name : KTR9_1310 (KTR9_1310)
Accession : YP_006668105.1
Strain : Gordonia sp. KTR9
Genome accession: NC_018581
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1489574 - 1490260 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTCGTGGTCGATGACGATCGGGCCGTCCGGGAGTCGTTGCGACGGTCGCTCACCTTCAACGGCTACAGCGT
CGAGACCGCAGGCGACGGCATCGAGGCACTCGAGAAGATCCTGGCCGACCGGCCTGACGTGGTGATCCTCGACGTCATGA
TGCCCCGGCTCGACGGGCTCGAGGTGTGCCGCCGGCTCCGCTCCGCCGGTGACGACCTTCCCATCCTGGTGCTGACCGCA
CGCGACTCGGTGTCCGAGCGGGTGTCCGGTCTCGACGCCGGGGCCGACGACTACCTACCCAAACCGTTCGCGCTCGAAGA
ACTCCTCGCCCGGTTGCGGGCGCTGCTGCGCCGTGCCTCGCCCGAGGACGACGCGGATTCGGAGACCCTGACCTTCGCCG
ATCTCTCGCTCGACCCCGTCACCCGCGACGTCACCCGCGGCGAGCGGTCGATCAGCCTGACCCGCACCGAGTTCGCCCTC
CTCGAGATGCTGATGGCCAACCCGCGTCGGGTGCTGTCGCGCAGCCGCATCCTCGAAGAGGTCTGGGGATACGACTTCCC
GACGTCGGGCAACGCCCTCGAGGTCTACGTCGGATATCTCCGGCGCAAGACCGAGGCGGACGGCGAGCCGCGACTGATCC
ACACCGTGCGCGGTGTCGGATATGTCCTCCGGGAGACGCCGCCCTAG

Protein sequence : 
MRILVVDDDRAVRESLRRSLTFNGYSVETAGDGIEALEKILADRPDVVILDVMMPRLDGLEVCRRLRSAGDDLPILVLTA
RDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRASPEDDADSETLTFADLSLDPVTRDVTRGERSISLTRTEFAL
LEMLMANPRRVLSRSRILEEVWGYDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0083 Protein 3e-36 49
KTR9_1310 YP_006668105.1 DNA-binding response regulator HE999704.1.gene1528. Protein 2e-39 47
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0125 Protein 4e-34 46
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0638 Protein 5e-30 46
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0111 Protein 7e-35 45
KTR9_1310 YP_006668105.1 DNA-binding response regulator AE000516.2.gene3505. Protein 3e-35 45
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0308 Protein 4e-33 44
KTR9_1310 YP_006668105.1 DNA-binding response regulator BAC0197 Protein 2e-31 44
KTR9_1310 YP_006668105.1 DNA-binding response regulator U82965.2.orf14.gene. Protein 5e-24 42
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 2e-35 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator AE015929.1.gene1106. Protein 1e-30 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_002516.2.879194.p Protein 7e-24 41
KTR9_1310 YP_006668105.1 DNA-binding response regulator NC_012469.1.7685629. Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KTR9_1310 YP_006668105.1 DNA-binding response regulator VFG1390 Protein 7e-84 86
KTR9_1310 YP_006668105.1 DNA-binding response regulator VFG1386 Protein 8e-46 52
KTR9_1310 YP_006668105.1 DNA-binding response regulator VFG1389 Protein 7e-44 52
KTR9_1310 YP_006668105.1 DNA-binding response regulator VFG0596 Protein 1e-33 43