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Name : KTR9_0120 (KTR9_0120) Accession : YP_006666924.1 Strain : Gordonia sp. KTR9 Genome accession: NC_018581 Putative virulence/resistance : Unknown Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 136796 - 140266 bp Length : 3471 bp Strand : + Note : - DNA sequence : ATGGCCGATCCGCGTGGACTGCCCGGACATACTCATGTTCCCGACTACCGTTTACGCATGGCCACCGACACCCCCCTCGC GCCGGTCGACCCCGAGAACCCCGATGAGCGTCACATCGGCACGTCGCGCGCACCCACCGCCGCCGATCGTCGATCCCTGG CGCTCCTCGACAAGATCAGGCGACCGACCGGGTTCGGTACCCGCGCTCCGCACATCGCCGGCACCGTGGTCGGTGTCCTC GCCGCCATCGCGTTGCTGTCCAGTCTCTTTCCGGCGATCCGGCACCTGATCCACGACCCGCGACGCTACGTCGACGACTA CATCATCACCCTGCCCGACACCAGCTTCGCCTGGGCGTTCGTGCTGGCGCTCATCGCCGTCGCGCTCTCCGCACGCAAGC GGATCGCCTGGTGGATCAGCGTGGTCTACCTCGTGCTGTTCATGACGGCCAACGTTCTCTATCTGGTGCCGGCGCTCGAG GACGACCTCGGCGTCACGACCTGGGACCGCACCAACATCTACCTCGGCCTGTTCATCGACGCCCTCGCGCTGATGTTCCT GCTGTCCACGTACCGGCAGTTCTACACACGGGTCCGCAGGGGAGCGATCCCCGCGGCGTTCGGCACCCTCGTCGCCGGCC TGATCATCGCGACGTTGCTGGGCTGGGCGCTCGTATGGGCGTTCCCGCACACCCTCACCCGTGGCGACCGGTTGCCGTAT GCGTTCAACCGGGTGGTCGCCTTCGGCGCCATCGACCAAGACGCGTCGTTCGACGGACGGCACACGCATCTCTTCGTCAA CGGGTTGCTGGGATTGTTCGGGGCGCTGGCGCTGATCGCCGCGGCGATCGTGTTGTTCCGTTCGCAGCGGCTGCGCTGGC TCATCACCGCCGAGGACGAGGCACTCATCCGCGCTCTGATCGCGCGGTTCAACGACGACGATTCGCTCGCCTACTTCTCG ACCCGTCGCGACAAGGCCGTCGTGTTCTCGCCCGACGGCCGCGCGGCCATCACCTACCGGGTGGAGGTCGGCGTCGGACT GGCAGGCGGTGACCCGATCGGCGACCCGGAGTCGTGGCCCGACGCCATCGCCGAATTCCTCACGCTCTGCGAAAAATACG GATGGCATCCGGCGTCGATGGGGTCGAGCCCACGTGGCGCGGCGGCATTCGACGCCGCCGGTTTCGTCTCCCTCAACATC GGCGACGAGGCCATCCTCCACACGCGTGAGTTCAGCCTCAGCGGACCCGCGATGAAGGCGGTGCGCCAGGCCGTGACACG CACCCGGCGTGCCGGAGTCGATGTCCGCATCAGGCGGCACTCCGAGATCGGTGACACCGAGATGGCGCAGATCGTCGCGC GGGCCGATGACTGGCGCGACACCGACGAGGAACGCGGCTTCGCGATGGCGCTCTCGCGCATCGGCGATCCCGCGGACGGC GACTGCCTGCTGGTCGAGGCGGTGATGGACGAAGGCGCTCCCGACGAGAGGGTCGTCGGGATGCTGTCCTTCGTGCCGTG GGGGCGCCGTGGGGTCTCGCTCGACCTGATGCGTCGCGACCGGCACGGGCCCAACGGCGTCGTGGAGACGATGGTCGCCG AATTGTGCCGCGACTCCGAACAGTTGGGCATCACCGAGGTATCCCTGAACTTCGCCGCATTCCGGGCGTTCTTCGAGCAG GGGCCCCAGATCGGTGCCGGGCCCGTGATGCGGATGGGTTACTCGGTGCTGATGTTCGGCTCGCGGTTCTTCCAGATGGA GTCGCTGTACAAGTCGAATGCGAAGTATCTGCCGGACTGGCAGTCGCGCTACCTGTGCTTCGAGGACAGCCGAATCCTGC CCCGGGTGGGGCTGGCCGCGATCGTGACCGAGGGCTTCATCACGCTGCCGCGCTTCGGCCGGGCCAAGCACTACACGCAA GGCCAGCCGTCGATCCCGGCCGGTGTCGACGCCCCCGCCCTCATCGCCGAACTCGACGCCGAGGCGGCCACCCCGGAGGG TGCGGTCGTCCACCGTCCGGAGCAGGTCCGCGTCCGGCTCGAGAAGATGGACCGGCTCGTCGAACGGGGCTTCGATCCGT ACCCGCCGGCGGACCGGCCCACGCACACGATCGCGCAGGCCAAGGCCGAACCCGAAGGGACCGTCGTCACCGTCGCCGGC CGCGTCACGCGGCTTCGCGACTTCGGCAAGGTGGTGTTCGCCGACGTGCACGACTGGTCCGGCGAGGTCCAGGTCCTCGT CGAGGATTCCCGCGTGATCCCGGGAACTCCCGACTTCGGCACCGACGTCGACCTCGGTGACCTGATCCAGGCGCGCGGCG TCGTGGGCACCAGCCGCAAGGGCGAGCTGTCGATCCTGATCGACGCCTGGCGGATCAACGGCAAGTGCCTGCGTCCGCTG CCCGACAAGTGGGCCGGTCTCACCGATCCGGAAGCGCGTGTCCGCCAGCGCTATGTCGACCTGGCCATCAACGAGCAGAC CCGGGCATCACTCGCGACACGCAGCCTCGTCGTGAAGTCGTTGCGCGACTTTCTCTCCGCGCGTGGATATCTGGAGGTCG AGACACCGATCCTCCAACAGATCCACGGCGGTGCCAACGCAACCCCGTTCCAGACGCACATCAACGCCTATAACCTCGAC CTGTACCTGCGCATCGCGCCGGAGCTCTACCTCAAACGGCTCTGCGTCGGCGGTGTGGAGAAGGTCTTCGAGATCGGCCG CAACTTCCGCAACGAGGGCGTGGACTTCAGTCACAACCCGGAGTTCACCAGCCTCGAAGCCTATGAGGCGCACAGTGATT ACCTCAAGATGCTCGACCTCACCCGCGAGATGATCCAGCACGCGGCGACCGCCGCCTACGGGGAACCGGTCATCGTGCGG ACCGACGCCGACGGAAACGAAGAGCGCGTGGACATCTCGGGGGAGTGGCCGGTCAAGACCGTCCACCAGGTGGTGTCGGA AGGGGCGGGGGAGGAGATCACCCCCGACACCCCCGTCGAGGTCTTGCGCGCCGTGTGCGATCGCCTCGAGATCAACCACC GGCCGGACTGGGACGCCGGGCAGATCGTGCTGGAACTCTACGAGCACCTCGGCGAGGACCGCACGACGTTCCCGACCTTC TACATCGACTTCCCGACGTCGACATCGCCCCTCACACGCGCGCACCGGAGCAAGCCGGGCGTCGCCGAGCGGTGGGATCT CGTGGCCTGGGGCGTCGAACTGGGCACTGCCTACACCGAGCTCACCGATCCGGTGGAGCAGCGCAAGCGCCTCACCGAGC AGTCGATCCTGGCGGCCGACGGCGACCCCGAGGCCATGGAACTCGACGAGGACTTCCTACAGGCGCTCGAGTACGCGATG CCGCCGACGGGCGGTCTCGGCGTCGGCGTCGACCGCGTGGTCATGCTCATCACCGGACAGTCGATCCGTGAGTCGCTGGC GTTCCCGCTCGCGAAACCACAGGACGCCTGA Protein sequence : MADPRGLPGHTHVPDYRLRMATDTPLAPVDPENPDERHIGTSRAPTAADRRSLALLDKIRRPTGFGTRAPHIAGTVVGVL AAIALLSSLFPAIRHLIHDPRRYVDDYIITLPDTSFAWAFVLALIAVALSARKRIAWWISVVYLVLFMTANVLYLVPALE DDLGVTTWDRTNIYLGLFIDALALMFLLSTYRQFYTRVRRGAIPAAFGTLVAGLIIATLLGWALVWAFPHTLTRGDRLPY AFNRVVAFGAIDQDASFDGRHTHLFVNGLLGLFGALALIAAAIVLFRSQRLRWLITAEDEALIRALIARFNDDDSLAYFS TRRDKAVVFSPDGRAAITYRVEVGVGLAGGDPIGDPESWPDAIAEFLTLCEKYGWHPASMGSSPRGAAAFDAAGFVSLNI GDEAILHTREFSLSGPAMKAVRQAVTRTRRAGVDVRIRRHSEIGDTEMAQIVARADDWRDTDEERGFAMALSRIGDPADG DCLLVEAVMDEGAPDERVVGMLSFVPWGRRGVSLDLMRRDRHGPNGVVETMVAELCRDSEQLGITEVSLNFAAFRAFFEQ GPQIGAGPVMRMGYSVLMFGSRFFQMESLYKSNAKYLPDWQSRYLCFEDSRILPRVGLAAIVTEGFITLPRFGRAKHYTQ GQPSIPAGVDAPALIAELDAEAATPEGAVVHRPEQVRVRLEKMDRLVERGFDPYPPADRPTHTIAQAKAEPEGTVVTVAG RVTRLRDFGKVVFADVHDWSGEVQVLVEDSRVIPGTPDFGTDVDLGDLIQARGVVGTSRKGELSILIDAWRINGKCLRPL PDKWAGLTDPEARVRQRYVDLAINEQTRASLATRSLVVKSLRDFLSARGYLEVETPILQQIHGGANATPFQTHINAYNLD LYLRIAPELYLKRLCVGGVEKVFEIGRNFRNEGVDFSHNPEFTSLEAYEAHSDYLKMLDLTREMIQHAATAAYGEPVIVR TDADGNEERVDISGEWPVKTVHQVVSEGAGEEITPDTPVEVLRAVCDRLEINHRPDWDAGQIVLELYEHLGEDRTTFPTF YIDFPTSTSPLTRAHRSKPGVAERWDLVAWGVELGTAYTELTDPVEQRKRLTEQSILAADGDPEAMELDEDFLQALEYAM PPTGGLGVGVDRVVMLITGQSIRESLAFPLAKPQDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-153 | 41 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 41 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 41 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 41 |
