Gene Information

Name : RM11_0077 (RM11_0077)
Accession : YP_006664539.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : Iron transport protein yfeB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 103393 - 104220 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence : 
ATGACGGGATCTGGAATATTTGTCCAAGGGGTAACGGTAACTTATCGTAATGGACATACAGCTTTACGCGAAGTGAATTT
TGAAAGCCCAACAGGTTCCATTACAGCATTAGTTGGCGTTAATGGATCAGGTAAATCAACGTTATTTAAAGCTATTATGG
GGTTTGTGCAACCATCAAAAGGAAAAATTCGTGTGTTTGGTTTGCCCGTTGGCACGGCTTTGAAACAAAATCTTATTGCT
TATGTTCCTCAGAGTGAGGATGTTGATTGGAATTTTCCTGTTCTCGTTGAGGATGTTGTTTTGATGGGGCGATACGGTCA
CATGAATTTCTTTCGTTATGCACGGGCGCGGGATTATAAAGCTGTCCGTATTGCATTAGAACGCGTCGATATGTTGGCAT
TTGCTAAGCGTCAAATTGGTGAACTTTCTGGTGGACAGAAAAAGCGCGTTTTTCTAGCACGTGCTCTAGCACAGCAGGCA
AAAGCTATTTTATTAGATGAGCCATTTACAGGGGTTGATGTCACAACAGAAGATAAAATCATTGCTTTGTTACAAGATCT
TCGTAAAGAAGGGGCTGTGATATTAGTTTCTACCCACAATTTGGGTTCTGTTCGTGAATTTTGTGATCACACGGTTTTAA
TAAAGGGAACGGTTTTAGCTTCCGGGTTAACTGAAACTGTCTTTACAAAGAAAAATCTTGAGAAAACTTTTGGAGGTGCT
TTGCATCATAATATTTTTGATTTTCAAAGCGCAAAAAATGATATTTACATAGGGGATGAACAAGCTTTTGTTCTTGAAAG
TTCTCAAAGAATGGAGCATGTTGCATGA

Protein sequence : 
MTGSGIFVQGVTVTYRNGHTALREVNFESPTGSITALVGVNGSGKSTLFKAIMGFVQPSKGKIRVFGLPVGTALKQNLIA
YVPQSEDVDWNFPVLVEDVVLMGRYGHMNFFRYARARDYKAVRIALERVDMLAFAKRQIGELSGGQKKRVFLARALAQQA
KAILLDEPFTGVDVTTEDKIIALLQDLRKEGAVILVSTHNLGSVREFCDHTVLIKGTVLASGLTETVFTKKNLEKTFGGA
LHHNIFDFQSAKNDIYIGDEQAFVLESSQRMEHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-81 66
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-81 65
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-81 65
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-81 65
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-81 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_0077 YP_006664539.1 Iron transport protein yfeB BAC0440 Protein 2e-74 68
RM11_0077 YP_006664539.1 Iron transport protein yfeB BAC0350 Protein 7e-82 65
RM11_0077 YP_006664539.1 Iron transport protein yfeB BAC0400 Protein 5e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_0077 YP_006664539.1 Iron transport protein yfeB VFG0526 Protein 7e-82 65